RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 ALBP02768 609 aa11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 MAGP20916 626 aa11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 ALAS2P22557 587 aa11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 ITGA3P26006 1051 aa11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 MSNP26038 577 aaKnown RBP11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 PLOD1Q02809 727 aaPredicted RBP11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 GRB7Q14451 532 aa11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 NKG7Q16617 165 aa11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 KIRREL2Q6UWL6 708 aa11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 VRK3Q8IV63 474 aa11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 FAM71DQ8N9W8 422 aa11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 LMNTD1Q8N9Z9 388 aa11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 DLG3Q92796 817 aa11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 SLC26A1Q9H2B4 701 aa11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 WDR54Q9H977 334 aa11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 LRRC40Q9H9A6 602 aa11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 AGPAT4Q9NRZ5 378 aa11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 IRAK4Q9NWZ3 460 aa11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 DUSP10Q9Y6W6 482 aa11.65□□□□□ -0.54
CACNA1A-250ENST00000637809 CACNA1DQ01668 2161 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 CCDC78A2IDD5 438 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 TJP3O95049 919 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 TNFRSF8P28908 595 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 CCR7P32248 378 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 TSFMP43897 325 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 RAB28P51157 221 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 GDF10P55107 478 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 RWDD2BP57060 319 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 Q0VFX4 171 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 SYTL3Q4VX76 610 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 DNAJC21Q5F1R6 531 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 FCRL6Q6DN72 434 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 ARHGEF18Q6ZSZ5 1173 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 TTLL10Q6ZVT0 673 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 CCDC170Q8IYT3 715 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 OR13J1Q8NGT2 312 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 GRHL3Q8TE85 626 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 LRRC45Q96CN5 670 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 ZNF285Q96NJ3 590 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 MESP1Q9BRJ9 268 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 LUC7LQ9NQ29 371 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 IMPACTQ9P2X3 320 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 CTSFQ9UBX1 484 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 CDC23Q9UJX2 597 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 AKAP9Q99996 3911 aa11.64□□□□□ -0.55
CACNA1A-250ENST00000637809 PIKFYVEQ9Y2I7 2098 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 FITM1A5D6W6 292 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 VSTM2BA6NLU5 285 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 DSCR3O14972 297 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 LRRTM2O43300 516 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 ZNF189O75820 626 aaPredicted RBP11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 OR56A5P0C7T3 313 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 PRF1P14222 555 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 CD9P21926 228 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 MCM3P25205 808 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 ARSFP54793 590 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 SPA17Q15506 151 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 CCDC38Q502W7 563 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 AGAP7PQ5VUJ5 663 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 SLC22A15Q8IZD6 547 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 SLC34A3Q8N130 599 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 DTWD1Q8N5C7 304 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 C2orf73Q8N5S3 287 aaPredicted RBP11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 LRRC57Q8N9N7 239 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 OR11G2Q8NGC1 345 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 DNAJB14Q8TBM8 379 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 LKAAEAR1Q8TD35 194 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 COG1Q8WTW3 980 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 FAR1Q8WVX9 515 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 AGAP4Q96P64 663 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 IL17FQ96PD4 163 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 MRM3Q9HC36 420 aaKnown RBP11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 CUTCQ9NTM9 273 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 SLC2A6Q9UGQ3 507 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 CIDEBQ9UHD4 219 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 OSGIN2Q9Y236 505 aa11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 R3HDM2Q9Y2K5 976 aaKnown RBP11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 REXO2Q9Y3B8 237 aaKnown RBP11.63□□□□□ -0.55
CACNA1A-250ENST00000637809 PRICKLE3O43900 615 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 KDM1AO60341 852 aa11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 GPC4O75487 556 aa11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 MED26O95402 600 aa11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 S1PR4O95977 384 aa11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 EDN3P14138 238 aa11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 GRIA3P42263 894 aa11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 OR1D4P47884 311 aa11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 CSE1LP55060 971 aaKnown RBP11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 CDC16Q13042 620 aa11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 KLF1Q13351 362 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 SEMA3AQ14563 771 aa11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 ZNF169Q14929 603 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 ZRSR2Q15696 482 aaKnown RBP11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 YOD1Q5VVQ6 348 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 B3GNTL1Q67FW5 361 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 FIGLAQ6QHK4 219 aa11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 SHISA6Q6ZSJ9 500 aa11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 ZNF534Q76KX8 674 aa11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 PARP9Q8IXQ6 854 aa11.62□□□□□ -0.55
CACNA1A-250ENST00000637809 RNF214Q8ND24 703 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms