RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CYP2A13Q16696 494 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 TSNAXIP1Q2TAA8 658 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 ANKS6Q68DC2 871 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 KLC3Q6P597 504 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 WDR74Q6RFH5 385 aaPredicted RBP15.5■□□□□ 0.07
CLN6-216ENST00000636876 MBOAT1Q6ZNC8 495 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 FRA10AC1Q70Z53 315 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 ISCA2Q86U28 154 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 GPSM1Q86YR5 675 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 LINC01555Q8NAE3 123 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 HIST1H2AHQ96KK5 128 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 CCDC138Q96M89 665 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 TSNARE1Q96NA8 513 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 HIST1H2AJQ99878 128 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 DPYSL5Q9BPU6 564 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 NUDT22Q9BRQ3 303 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 H2AFJQ9BTM1 129 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 TWSG1Q9GZX9 223 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 RDH14Q9HBH5 336 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 ZNF358Q9NW07 568 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 HRASLS2Q9NWW9 162 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 EPHA6Q9UF33 1036 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 LNPEPQ9UIQ6 1025 aa15.5■□□□□ 0.07
CLN6-216ENST00000636876 SPEGQ15772 3267 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 RGS16O15492 202 aaPredicted RBP15.49■□□□□ 0.07
CLN6-216ENST00000636876 CHRM5P08912 532 aaPredicted RBP15.49■□□□□ 0.07
CLN6-216ENST00000636876 POLR2CP19387 275 aaPredicted RBP15.49■□□□□ 0.07
CLN6-216ENST00000636876 GLRBP48167 497 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 PNLIPRP1P54315 467 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 CDKL1Q00532 357 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 ACAP2Q15057 778 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 CDCP2Q5VXM1 449 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 ARMC6Q6NXE6 501 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 SH2D5Q6ZV89 423 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 HDXQ7Z353 690 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 TMPRSS9Q7Z410 1059 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 TRABD2AQ86V40 505 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 LCA5Q86VQ0 697 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 LMNTD1Q8N9Z9 388 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 RHEBL1Q8TAI7 183 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 HMGCLL1Q8TB92 370 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 STAG3L4Q8TBR4 150 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 ZNF480Q8WV37 535 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 FBXL8Q96CD0 374 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 ATOH8Q96SQ7 321 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 RAB33BQ9H082 229 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 ZMYND15Q9H091 742 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 ARL15Q9NXU5 204 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 UTP6Q9NYH9 597 aaKnown RBP15.49■□□□□ 0.07
CLN6-216ENST00000636876 STOX2Q9P2F5 926 aaPredicted RBP15.49■□□□□ 0.07
CLN6-216ENST00000636876 RNF112Q9ULX5 631 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 ENTPD2Q9Y5L3 495 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 KNTC1P50748 2209 aa15.49■□□□□ 0.07
CLN6-216ENST00000636876 MN1Q10571 1320 aaPredicted RBP15.48■□□□□ 0.07
CLN6-216ENST00000636876 PIPSLA2A3N6 862 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 GSAPA4D1B5 854 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 ZNF839A8K0R7 811 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 MATN2O00339 956 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 CAPN5O15484 640 aaPredicted RBP15.48■□□□□ 0.07
CLN6-216ENST00000636876 KERAO60938 352 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 GSTA1P08263 222 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 HOXB3P14651 431 aaPredicted RBP15.48■□□□□ 0.07
CLN6-216ENST00000636876 IMPA1P29218 277 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 KCNC1P48547 511 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 KPNA2P52292 529 aaKnown RBP15.48■□□□□ 0.07
CLN6-216ENST00000636876 GFERP55789 205 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 PRKAA1Q13131 559 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 KIR2DS3Q14952 304 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 TGFBIQ15582 683 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 TECRLQ5HYJ1 363 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 TMEM71Q6P5X7 295 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 RBM44Q6ZP01 1051 aaKnown RBP15.48■□□□□ 0.07
CLN6-216ENST00000636876 PLXDC1Q8IUK5 500 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 SYTL1Q8IYJ3 562 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 C2orf73Q8N5S3 287 aaPredicted RBP15.48■□□□□ 0.07
CLN6-216ENST00000636876 OR4D9Q8NGE8 314 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 ATL1Q8WXF7 558 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 ADAMTS14Q8WXS8 1223 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 SCYL1Q96KG9 808 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 TGM7Q96PF1 710 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 RUFY1Q96T51 708 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 SPHK1Q9NYA1 384 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 ACTR10Q9NZ32 417 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 TMEM9Q9P0T7 183 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 POMT2Q9UKY4 750 aa15.48■□□□□ 0.07
CLN6-216ENST00000636876 C2orf74A8MZ97 194 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 GUCA1CO95843 209 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 MT-CO3P00414 261 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 C9P02748 559 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 ANXA5P08758 320 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 RBP1P09455 135 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 KRT4P19013 534 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 PEBP1P30086 187 aaKnown RBP15.47■□□□□ 0.07
CLN6-216ENST00000636876 CLDN6P56747 220 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 PPP1CAP62136 330 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 SLC18A2Q05940 514 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 FASTKQ14296 549 aaKnown RBP15.47■□□□□ 0.07
CLN6-216ENST00000636876 CDKL4Q5MAI5 379 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 HES3Q5TGS1 186 aa15.47■□□□□ 0.07
CLN6-216ENST00000636876 IRGCQ6NXR0 463 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms