RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 KRT33AO76009 404 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 ZWINTO95229 277 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 UGT1A4P22310 534 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 GABRA5P31644 462 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 PTGER3P43115 390 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 RPL21P46778 160 aaKnown RBP2.86□□□□□ -1.95
SRP54-214ENST00000630962 NOVP48745 357 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 PAX9P55771 341 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 SP3Q02447 781 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 ELAVL2Q12926 359 aaKnown RBP2.86□□□□□ -1.95
SRP54-214ENST00000630962 GRAPQ13588 217 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 PCLAFQ15004 111 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 CBWD6Q4V339 395 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 IGSF11Q5DX21 431 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 CBWD3Q5JTY5 395 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 SLC35D3Q5M8T2 416 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 NOTUMQ6P988 496 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 KBTBD6Q86V97 674 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 TMEM139Q8IV31 216 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 NPEPL1Q8NDH3 523 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 GPRC5AQ8NFJ5 357 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 OR4C3Q8NH37 302 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 MAPK15Q8TD08 544 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 SSMEM1Q8WWF3 244 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 ZNF622Q969S3 477 aaKnown RBP eCLIP2.86□□□□□ -1.954e-7■□□□□ 9.4
SRP54-214ENST00000630962 GHITMQ9H3K2 345 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 CHST11Q9NPF2 352 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 EQTNQ9NQ60 294 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 PIH1D3Q9NQM4 214 aaKnown RBP2.86□□□□□ -1.95
SRP54-214ENST00000630962 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.86□□□□□ -1.95
SRP54-214ENST00000630962 MRPL15Q9P015 296 aaKnown RBP2.86□□□□□ -1.95
SRP54-214ENST00000630962 ZHX1Q9UKY1 873 aaPredicted RBP2.86□□□□□ -1.95
SRP54-214ENST00000630962 MOB4Q9Y3A3 225 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 RIPK3Q9Y572 518 aa2.86□□□□□ -1.95
SRP54-214ENST00000630962 RSF1Q96T23 1441 aaPredicted RBP2.85□□□□□ -1.95
SRP54-214ENST00000630962 C15orf61A6NNL5 157 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 H0YAE9 185 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 OR10H2O60403 315 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 DANCRP0C864 163 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 PRKAR1AP10644 381 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 HSPA8P11142 646 aaKnown RBP2.85□□□□□ -1.95
SRP54-214ENST00000630962 PFKFB1P16118 471 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 CDH3P22223 829 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 HLA-FP30511 346 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 CSTF2P33240 577 aaKnown RBP eCLIP2.85□□□□□ -1.95
SRP54-214ENST00000630962 HNF4AP41235 474 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 CASP2P42575 452 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 TSFMP43897 325 aaKnown RBP2.85□□□□□ -1.95
SRP54-214ENST00000630962 TPD52P55327 224 aaPredicted RBP2.85□□□□□ -1.95
SRP54-214ENST00000630962 GSCP56915 257 aaPredicted RBP2.85□□□□□ -1.95
SRP54-214ENST00000630962 LMO4P61968 165 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 DMPKQ09013 629 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 RAPSNQ13702 412 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 TNIP1Q15025 636 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 SNAPC1Q16533 368 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 PHKG1Q16816 387 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 TAF1BQ53T94 588 aaPredicted RBP2.85□□□□□ -1.95
SRP54-214ENST00000630962 C2CD6Q53TS8 623 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 XKR6Q5GH73 641 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 SPATA1Q5VX52 437 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 MZT2BQ6NZ67 158 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 DOK6Q6PKX4 331 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 ERC1Q8IUD2 1116 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 LACC1Q8IV20 430 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 NDUFAF2Q8N183 169 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 ARHGAP24Q8N264 748 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 SYT2Q8N9I0 419 aaPredicted RBP2.85□□□□□ -1.95
SRP54-214ENST00000630962 GTF3AQ92664 365 aaKnown RBP2.85□□□□□ -1.95
SRP54-214ENST00000630962 SLCO2A1Q92959 643 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 CDK19Q9BWU1 502 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 DGCR6LQ9BY27 220 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 UPF3AQ9H1J1 476 aaKnown RBP2.85□□□□□ -1.95
SRP54-214ENST00000630962 S1PR5Q9H228 398 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 OPA3Q9H6K4 179 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 BLOC1S4Q9NUP1 217 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 P4HTMQ9NXG6 502 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 EPHA6Q9UF33 1036 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 LRWD1Q9UFC0 647 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 PPP1R3CQ9UQK1 317 aa2.85□□□□□ -1.95
SRP54-214ENST00000630962 A0A1B0GVY2 172 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 ENO4A6NNW6 628 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 MEIS2O14770 477 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 LINGO3P0C6S8 592 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 TMEM50BP56557 158 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 STK4Q13043 487 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 RIGQ13278 110 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 FASTKD3Q14CZ7 662 aaKnown RBP2.84□□□□□ -1.95
SRP54-214ENST00000630962 MAPRE1Q15691 268 aaKnown RBP2.84□□□□□ -1.95
SRP54-214ENST00000630962 RNASEH2BQ5TBB1 312 aaKnown RBP2.84□□□□□ -1.95
SRP54-214ENST00000630962 FAM205BPQ63HN1 556 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 FAM198BQ6UWH4 519 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 BRINP3Q76B58 766 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 AACSQ86V21 672 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 ADIPOR2Q86V24 386 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 DNAAF5Q86Y56 855 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 CERS3Q8IU89 383 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 CEP57L1Q8IYX8 460 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 MAML2Q8IZL2 1156 aaPredicted RBP2.84□□□□□ -1.95
SRP54-214ENST00000630962 EID3Q8N140 333 aa2.84□□□□□ -1.95
SRP54-214ENST00000630962 OR6S1Q8NH40 331 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms