RNA–Protein interactions for RNA: ENST00000627179.1

LINC01338-201, Transcript of long intergenic non-protein coding RNA 1338, humanhuman

TSL 3 BASIC

Gene LINC01338, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01338-201ENST00000627179 PRICKLE1Q96MT3 831 aaPredicted RBP5.24□□□□□ -1.57
LINC01338-201ENST00000627179 ZNF48Q96MX3 618 aaPredicted RBP5.24□□□□□ -1.57
LINC01338-201ENST00000627179 SMC6Q96SB8 1091 aa5.24□□□□□ -1.57
LINC01338-201ENST00000627179 WDR83Q9BRX9 315 aaKnown RBP5.24□□□□□ -1.57
LINC01338-201ENST00000627179 MLPHQ9BV36 600 aaPredicted RBP5.24□□□□□ -1.57
LINC01338-201ENST00000627179 CINPQ9BW66 212 aaPredicted RBP5.24□□□□□ -1.57
LINC01338-201ENST00000627179 POLR1EQ9GZS1 481 aaKnown RBP5.24□□□□□ -1.57
LINC01338-201ENST00000627179 IL22Q9GZX6 179 aa5.24□□□□□ -1.57
LINC01338-201ENST00000627179 LMAN2LQ9H0V9 348 aa5.24□□□□□ -1.57
LINC01338-201ENST00000627179 SLC25A51Q9H1U9 297 aa5.24□□□□□ -1.57
LINC01338-201ENST00000627179 KCNK9Q9NPC2 374 aa5.24□□□□□ -1.57
LINC01338-201ENST00000627179 PPANQ9NQ55 473 aaKnown RBP5.24□□□□□ -1.57
LINC01338-201ENST00000627179 VPS45Q9NRW7 570 aa5.24□□□□□ -1.57
LINC01338-201ENST00000627179 INTS9Q9NV88 658 aaKnown RBP5.24□□□□□ -1.57
LINC01338-201ENST00000627179 NKIRAS1Q9NYS0 192 aa5.24□□□□□ -1.57
LINC01338-201ENST00000627179 TXNDC16Q9P2K2 825 aa5.24□□□□□ -1.57
LINC01338-201ENST00000627179 UBA2Q9UBT2 640 aaPredicted RBP5.24□□□□□ -1.57
LINC01338-201ENST00000627179 CTNNAL1Q9UBT7 734 aa5.24□□□□□ -1.57
LINC01338-201ENST00000627179 STOML2Q9UJZ1 356 aa5.24□□□□□ -1.57
LINC01338-201ENST00000627179 FAM169AQ9Y6X4 670 aa5.24□□□□□ -1.57
LINC01338-201ENST00000627179 KIAA0100Q14667 2235 aaKnown RBP5.23□□□□□ -1.57
LINC01338-201ENST00000627179 FAM237BA0A1B0GVD1 139 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 TMEM120BA0PK00 339 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 FAM159BA6NKW6 160 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 SRRM3A6NNA2 597 aaPredicted RBP5.23□□□□□ -1.57
LINC01338-201ENST00000627179 H3BUI4 141 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 J3KR12 359 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 KDELR3O43731 214 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 SHOX2O60902 331 aaPredicted RBP5.23□□□□□ -1.57
LINC01338-201ENST00000627179 USP12O75317 370 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 PMPCBO75439 489 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 USP1O94782 785 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 LUC7L3O95232 432 aaKnown RBP5.23□□□□□ -1.57
LINC01338-201ENST00000627179 MT-ND3P03897 115 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 KLKB1P03952 638 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 CA3P07451 260 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 SNRPAP09012 282 aaKnown RBP5.23□□□□□ -1.57
LINC01338-201ENST00000627179 MYOGP15173 224 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 CHN1P15882 459 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 ENGP17813 658 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 CNTFP26441 200 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 VIPR2P41587 438 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 GRIA1P42261 906 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 CLCN2P51788 898 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 KRTAP10-9P60411 292 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 RPS24P62847 133 aaKnown RBP5.23□□□□□ -1.57
LINC01338-201ENST00000627179 CYP4F2P78329 520 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 SLC10A7Q0GE19 358 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 CDH18Q13634 790 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 LAMB3Q13751 1172 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 CRYMQ14894 314 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 EFTUD2Q15029 972 aaKnown RBP eCLIP5.23□□□□□ -1.57
LINC01338-201ENST00000627179 RAB30Q15771 203 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 FAM182AQ5T1J6 154 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 ARHGAP40Q5TG30 622 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 CYS1Q717R9 158 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 MARK2Q7KZI7 788 aaKnown RBP5.23□□□□□ -1.57
LINC01338-201ENST00000627179 ZNF771Q7L3S4 317 aaPredicted RBP5.23□□□□□ -1.57
LINC01338-201ENST00000627179 TRABD2AQ86V40 505 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 EXOC3L1Q86VI1 746 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 KLHDC8BQ8IXV7 354 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 MPP5Q8N3R9 675 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 GALNT16Q8N428 558 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 TEX26Q8N6G2 289 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 ZNF557Q8N988 423 aaPredicted RBP5.23□□□□□ -1.57
LINC01338-201ENST00000627179 ANKRD42Q8N9B4 389 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 TDRD5Q8NAT2 981 aaKnown RBP5.23□□□□□ -1.57
LINC01338-201ENST00000627179 SPATA22Q8NHS9 363 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 DDI1Q8WTU0 396 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 DCAKDQ8WVC6 231 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 SLC44A1Q8WWI5 657 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 PPP2R3CQ969Q6 453 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 CENPTQ96BT3 561 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 MTBPQ96DY7 904 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 OXNAD1Q96HP4 312 aaPredicted RBP5.23□□□□□ -1.57
LINC01338-201ENST00000627179 ASB2Q96Q27 587 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 CYP2S1Q96SQ9 504 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 APOL2Q9BQE5 337 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 TMEM79Q9BSE2 394 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 PRSS22Q9GZN4 317 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 IQCGQ9H095 443 aaKnown RBP5.23□□□□□ -1.57
LINC01338-201ENST00000627179 NSRP1Q9H0G5 558 aaKnown RBP5.23□□□□□ -1.57
LINC01338-201ENST00000627179 TRABDQ9H4I3 376 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 TASP1Q9H6P5 420 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 ZDHHC7Q9NXF8 308 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 NSMCE4AQ9NXX6 385 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.23□□□□□ -1.57
LINC01338-201ENST00000627179 ZNF212Q9UDV6 495 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 ZNF180Q9UJW8 692 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 ARHGAP26Q9UNA1 814 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 RPS6KL1Q9Y6S9 549 aa5.23□□□□□ -1.57
LINC01338-201ENST00000627179 SHROOM3Q8TF72 1996 aa5.22□□□□□ -1.57
LINC01338-201ENST00000627179 HTTP42858 3142 aa5.22□□□□□ -1.57
LINC01338-201ENST00000627179 NYNRINQ9P2P1 1898 aaKnown RBP5.22□□□□□ -1.57
LINC01338-201ENST00000627179 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.22□□□□□ -1.57
LINC01338-201ENST00000627179 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.22□□□□□ -1.57
LINC01338-201ENST00000627179 E2F8A0AVK6 867 aa5.22□□□□□ -1.57
LINC01338-201ENST00000627179 A1L4Q6 167 aa5.22□□□□□ -1.57
LINC01338-201ENST00000627179 HEATR9A2RTY3 570 aa5.22□□□□□ -1.57
LINC01338-201ENST00000627179 FAM47DPA6NHR8 397 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms