RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 TMCC3Q9ULS5 477 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 NDUFAF1Q9Y375 327 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 LAMB1P07942 1786 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 KIAA1551Q9HCM1 1747 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 KIR2DS5A0A0G2JLQ3 304 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 A0A0G2JNG1 304 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 A0A1W2PPM1 405 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 B2RBV5 119 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 H0Y3Z8 333 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 KIR2DS3K7RE56 304 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 PDGFBP01127 241 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-229ENST00000622668 AHSGP02765 367 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 CDH1P12830 882 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 HK3P52790 923 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 SEC24CP53992 1094 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 CYLC2Q14093 348 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-229ENST00000622668 FASTKQ14296 549 aaKnown RBP8.86□□□□□ -0.99
HDAC9-229ENST00000622668 SEMA3AQ14563 771 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 KIR2DS5Q14953 304 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 HEPACAMQ14CZ8 416 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 LSM12Q3MHD2 195 aaKnown RBP8.86□□□□□ -0.99
HDAC9-229ENST00000622668 ACSBG2Q5FVE4 666 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 TRIM73Q86UV7 250 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 ARHGAP12Q8IWW6 846 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 CDK20Q8IZL9 346 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 DTNBP1Q96EV8 351 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 ELF4Q99607 663 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-229ENST00000622668 LDAHQ9H6V9 325 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 YY1AP1Q9H869 796 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 CHCHD3Q9NX63 227 aaKnown RBP8.86□□□□□ -0.99
HDAC9-229ENST00000622668 ATXN10Q9UBB4 475 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 CPNE7Q9UBL6 633 aa8.86□□□□□ -0.99
HDAC9-229ENST00000622668 SUCOQ9UBS9 1254 aaKnown RBP8.86□□□□□ -0.99
HDAC9-229ENST00000622668 ZNF487B1APH4 448 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 TRAPPC6AO75865 159 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 ACRV1P26436 265 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 IL12BP29460 328 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 ARSDP51689 593 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 PER3P56645 1201 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 CLCQ05315 142 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 TUBB3Q13509 450 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 MAPKAPK3Q16644 382 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 ALG11Q2TAA5 492 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 DEFB134Q4QY38 66 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 ZC3H7AQ8IWR0 971 aaKnown RBP8.85□□□□□ -0.99
HDAC9-229ENST00000622668 UBR7Q8N806 425 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 SLC44A1Q8WWI5 657 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 C17orf62Q9BQA9 187 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 BOCQ9BWV1 1114 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 EBPLQ9BY08 206 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 VIPAS39Q9H9C1 493 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 EFCAB1Q9HAE3 211 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 H2AFY2Q9P0M6 372 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-229ENST00000622668 VTI1BQ9UEU0 232 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 POM121BA6NF01 834 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 TTC36A6NLP5 189 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 ZDHHC11BP0C7U3 371 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 SDHBP21912 280 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 TOR1AIP1Q5JTV8 583 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 SMYD5Q6GMV2 418 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 CILP2Q8IUL8 1156 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 PNPLA1Q8N8W4 532 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 MFSD2AQ8NA29 543 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 ICA1LQ8NDH6 482 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 TRPV3Q8NET8 790 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 GPN2Q9H9Y4 310 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-229ENST00000622668 LRTM1Q9HBL6 345 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 SEMA3GQ9NS98 782 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 IL17CQ9P0M4 197 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 INTS6Q9UL03 887 aaKnown RBP8.85□□□□□ -0.99
HDAC9-229ENST00000622668 MKL2Q9ULH7 1088 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-229ENST00000622668 POLR3HQ9Y535 204 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-229ENST00000622668 N6AMT1Q9Y5N5 214 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 LRRC14BA6NHZ5 514 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 VPS4BO75351 444 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 GJB3O75712 270 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 ALPPP05187 535 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 F3P13726 295 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 EFNA1P20827 205 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-229ENST00000622668 POU1F1P28069 291 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 RAB28P51157 221 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 NRG3P56975 720 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 ID2Q02363 134 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 ZP2Q05996 745 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 FCHO2Q0JRZ9 810 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 HSPB3Q12988 150 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 GRM7Q14831 915 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 CPTPQ5TA50 214 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 TRNP1Q6NT89 227 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 THOC6Q86W42 341 aaKnown RBP8.85□□□□□ -0.99
HDAC9-229ENST00000622668 C10orf107Q8IVU9 208 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 CSNK1A1LQ8N752 337 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 FAM13CQ8NE31 585 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 OR2I1PQ8NGU4 316 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 MARK4Q96L34 752 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 ZNF778Q96MU6 729 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 DGAT2Q96PD7 388 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 THTPAQ9BU02 230 aa8.85□□□□□ -0.99
HDAC9-229ENST00000622668 MECRQ9BV79 373 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms