RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 PLOD2O00469 737 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 INSIG1O15503 277 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 LUC7L3O95232 432 aaKnown RBP4.58□□□□□ -1.68
CPNE3-213ENST00000622183 GOSR1O95249 250 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 PAPSS2O95340 614 aaPredicted RBP4.58□□□□□ -1.68
CPNE3-213ENST00000622183 NTN1O95631 604 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 SPP1P10451 314 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 TNFRSF8P28908 595 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 SOAT1P35610 550 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 MNDAP41218 407 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 HOXA1P49639 335 aaPredicted RBP4.58□□□□□ -1.68
CPNE3-213ENST00000622183 RGS7P49802 495 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 ZNF132P52740 706 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 MTCP1P56278 107 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 ZXDBP98169 803 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 UGT3A2Q3SY77 523 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 SPOUT1Q5T280 376 aaKnown RBP4.58□□□□□ -1.68
CPNE3-213ENST00000622183 PDSS1Q5T2R2 415 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 SLC27A1Q6PCB7 646 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 CORO6Q6QEF8 472 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 ZNF852Q6ZMS4 543 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.58□□□□□ -1.68
CPNE3-213ENST00000622183 SLC9B2Q86UD5 537 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 PLD3Q8IV08 490 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 C4orf19Q8IY42 314 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 NAGSQ8N159 534 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 RYBPQ8N488 228 aaPredicted RBP4.58□□□□□ -1.68
CPNE3-213ENST00000622183 GPATCH11Q8N954 259 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 ZNF473Q8WTR7 871 aaKnown RBP4.58□□□□□ -1.68
CPNE3-213ENST00000622183 NUDCD2Q8WVJ2 157 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 SECTM1Q8WVN6 248 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 ZBTB9Q96C00 473 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 MEIS3Q99687 375 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 TRAF4Q9BUZ4 470 aaPredicted RBP4.58□□□□□ -1.68
CPNE3-213ENST00000622183 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 MMADHCQ9H3L0 296 aaPredicted RBP4.58□□□□□ -1.68
CPNE3-213ENST00000622183 C6orf106Q9H6K1 298 aaPredicted RBP4.58□□□□□ -1.68
CPNE3-213ENST00000622183 EVA1AQ9H8M9 152 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 ABCB8Q9NUT2 735 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 WDR83OSQ9Y284 106 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 CACNA1IQ9P0X4 2223 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 EVPLQ92817 2033 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 YDJCA8MPS7 323 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 FCGR3BO75015 233 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 ATP6AP2O75787 350 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 PGLSO95336 258 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 BAG2O95816 211 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 RLN1P04808 185 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 EEF2P13639 858 aaKnown RBP4.57□□□□□ -1.68
CPNE3-213ENST00000622183 IRF2P14316 349 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 PLA2G2AP14555 144 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 MYL6BP14649 208 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 NR2C2P49116 596 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 MFAP3P55082 362 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 ZNF415Q09FC8 603 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 MORF4L2Q15014 288 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 CTU2Q2VPK5 515 aaKnown RBP4.57□□□□□ -1.68
CPNE3-213ENST00000622183 LACTB2Q53H82 288 aaPredicted RBP4.57□□□□□ -1.68
CPNE3-213ENST00000622183 SPDYCQ5MJ68 293 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 ZNF449Q6P9G9 518 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 PRSS57Q6UWY2 283 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 GBP6Q6ZN66 633 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 NRARPQ7Z6K4 114 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 TMEM139Q8IV31 216 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 TUSC5Q8IXB3 177 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 SYCP3Q8IZU3 236 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 RASGEF1AQ8N9B8 481 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.57□□□□□ -1.68
CPNE3-213ENST00000622183 OR7G3Q8NG95 312 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 CTCFLQ8NI51 663 aaPredicted RBP4.57□□□□□ -1.68
CPNE3-213ENST00000622183 GRHL3Q8TE85 626 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 SCRN2Q96FV2 425 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 THOC1Q96FV9 657 aaKnown RBP4.57□□□□□ -1.68
CPNE3-213ENST00000622183 RTP3Q9BQQ7 232 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 C1QTNF4Q9BXJ3 329 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 MRPL9Q9BYD2 267 aaKnown RBP4.57□□□□□ -1.68
CPNE3-213ENST00000622183 SLC2A11Q9BYW1 496 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 TMEM206Q9H813 350 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 PELI2Q9HAT8 420 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 TRPV4Q9HBA0 871 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 TUFT1Q9NNX1 390 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 PTTG2Q9NZH5 202 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 SEPT10Q9P0V9 454 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 VPS18Q9P253 973 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 ZDHHC2Q9UIJ5 367 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 DAPK2Q9UIK4 370 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 TMED3Q9Y3Q3 217 aa4.57□□□□□ -1.68
CPNE3-213ENST00000622183 TRAV24A0A0B4J272 114 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 A0A1W2PPW3 197 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 CASTOR2A6NHX0 329 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 PRAC2D3DTV9 90 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 SLC28A2O43868 658 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 SELENOFO60613 162 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 GSRP00390 522 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 SNRNP70P08621 437 aaKnown RBP4.56□□□□□ -1.68
CPNE3-213ENST00000622183 T-ENOLP0DO92 83 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 MSH3P20585 1137 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 JAK1P23458 1154 aa4.56□□□□□ -1.68
CPNE3-213ENST00000622183 RPL21P46778 160 aaKnown RBP4.56□□□□□ -1.68
CPNE3-213ENST00000622183 FMO5P49326 533 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms