RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 OXSR1O95747 527 aaPredicted RBP15.4■□□□□ 0.06
NPHP4-211ENST00000622020 CYP4F2P78329 520 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 GBX1Q14549 363 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 NFE2Q16621 373 aaPredicted RBP15.4■□□□□ 0.06
NPHP4-211ENST00000622020 COLEC12Q5KU26 742 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 ARMC12Q5T9G4 340 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 RNF19BQ6ZMZ0 732 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 SERINC5Q86VE9 423 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 SERPINA9Q86WD7 417 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 PIK3C3Q8NEB9 887 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 TRPV1Q8NER1 839 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 PYURFQ96I23 114 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 TPD52L3Q96J77 140 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 CLPBQ9H078 707 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 RNF167Q9H6Y7 350 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 ZNF623O75123 536 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 PGLSO95336 258 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 CD36P16671 472 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 MAPKAPK2P49137 400 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 C6orf183Q5T699 404 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 CPZQ66K79 652 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 GLB1LQ6UWU2 654 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 LGALS12Q96DT0 336 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 GPR62Q9BZJ7 368 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 ASB8Q9H765 288 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 SIAEQ9HAT2 523 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 C1orf109Q9NX04 203 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 KIF17Q9P2E2 1029 aa15.4■□□□□ 0.06
NPHP4-211ENST00000622020 FAM32AQ9Y421 112 aaKnown RBP15.4■□□□□ 0.06
NPHP4-211ENST00000622020 DICER1Q9UPY3 1922 aaKnown RBP15.4■□□□□ 0.06
NPHP4-211ENST00000622020 A0A096LPI6 279 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 SCELO95171 688 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 PRAMEF1O95521 474 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 DBTP11182 482 aaKnown RBP15.39■□□□□ 0.05
NPHP4-211ENST00000622020 TYMPP19971 482 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 GTF2E2P29084 291 aaKnown RBP15.39■□□□□ 0.05
NPHP4-211ENST00000622020 C21orf33P30042 268 aaPredicted RBP15.39■□□□□ 0.05
NPHP4-211ENST00000622020 CLK1P49759 484 aaKnown RBP15.39■□□□□ 0.05
NPHP4-211ENST00000622020 MVKQ03426 396 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 KCNJ8Q15842 424 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 OR4F3Q6IEY1 312 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 USP50Q70EL3 339 aaPredicted RBP15.39■□□□□ 0.05
NPHP4-211ENST00000622020 RAVER1Q8IY67 606 aaKnown RBP15.39■□□□□ 0.05
NPHP4-211ENST00000622020 ADGRG2Q8IZP9 1017 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 MFSD4AQ8N468 514 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 FAM193BQ96PV7 902 aaPredicted RBP15.39■□□□□ 0.05
NPHP4-211ENST00000622020 MARCH7Q9H992 704 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 SPATA7Q9P0W8 599 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 CAB39Q9Y376 341 aaPredicted RBP15.39■□□□□ 0.05
NPHP4-211ENST00000622020 DHRS7Q9Y394 339 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 LOC100506127A0A0U1RQW1 187 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 GABARAPO95166 117 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 VIPP01282 170 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 ESR1P03372 595 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 TGM1P22735 817 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 HOXC8P31273 242 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 S100A3P33764 101 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 GATMP50440 423 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 ST13P50502 369 aaKnown RBP15.39■□□□□ 0.05
NPHP4-211ENST00000622020 GABARAPL2P60520 117 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 EPS8Q12929 822 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 GPR153Q6NV75 609 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 ADAMTSL2Q86TH1 951 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 TTC29Q8NA56 475 aaPredicted RBP15.39■□□□□ 0.05
NPHP4-211ENST00000622020 ZHX1-C8orf76Q96EF9 292 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 SCN3BQ9NY72 215 aa15.39■□□□□ 0.05
NPHP4-211ENST00000622020 TNPO3Q9Y5L0 923 aaKnown RBP15.39■□□□□ 0.05
NPHP4-211ENST00000622020 DYTNA2CJ06 578 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 RECQL5O94762 991 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-211ENST00000622020 CPSF4O95639 269 aaKnown RBP15.38■□□□□ 0.05
NPHP4-211ENST00000622020 DLGAP3O95886 979 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 PTGER3P43115 390 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 PCBP2Q15366 365 aaKnown RBP eCLIP15.38■□□□□ 0.051e-8■■■■■ 46
NPHP4-211ENST00000622020 SPRYD7Q5W111 196 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 GPR149Q86SP6 731 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 WBP2Q969T9 261 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 C8orf48Q96LL4 319 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 CCDC115Q96NT0 180 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 ADGRE3Q9BY15 652 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 TRIT1Q9H3H1 467 aaKnown RBP15.38■□□□□ 0.05
NPHP4-211ENST00000622020 SAMHD1Q9Y3Z3 626 aaKnown RBP15.38■□□□□ 0.05
NPHP4-211ENST00000622020 ACSL4O60488 711 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 PDYNP01213 254 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 KLKB1P03952 638 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 IL6P05231 212 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 COL6A1P12109 1028 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 RPL17P18621 184 aaKnown RBP15.38■□□□□ 0.05
NPHP4-211ENST00000622020 NUDT6P53370 316 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 RPS3AP61247 264 aaKnown RBP15.38■□□□□ 0.05
NPHP4-211ENST00000622020 VLDLRP98155 873 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 CLLU1OSQ5K130 101 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 PLEKHG7Q6ZR37 379 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 RTN4RL1Q86UN2 441 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-211ENST00000622020 CHPFQ8IZ52 775 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 OR6Q1Q8NGQ2 317 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 MCFD2Q8NI22 146 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 SELENOMQ8WWX9 145 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 PROX1Q92786 737 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 FATE1Q969F0 183 aa15.38■□□□□ 0.05
NPHP4-211ENST00000622020 APOLD1Q96LR9 279 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms