RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 CCDC3Q9BQI4 270 aa15.32■□□□□ 0.04
MALAT1-213ENST00000618227 CENPHQ9H3R5 247 aa15.32■□□□□ 0.04
MALAT1-213ENST00000618227 TSR3Q9UJK0 312 aaKnown RBP15.32■□□□□ 0.04
MALAT1-213ENST00000618227 MID2Q9UJV3 735 aa15.32■□□□□ 0.04
MALAT1-213ENST00000618227 PLLPQ9Y342 182 aa15.32■□□□□ 0.04
MALAT1-213ENST00000618227 FRYLO94915 3013 aa15.32■□□□□ 0.04
MALAT1-213ENST00000618227 LAMA1P25391 3075 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 PTPRZ1P23471 2315 aaPredicted RBP15.31■□□□□ 0.04
MALAT1-213ENST00000618227 OR5K3A6NET4 321 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 NTN3O00634 580 aaPredicted RBP15.31■□□□□ 0.04
MALAT1-213ENST00000618227 DUX1O43812 170 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 TYROBPO43914 113 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 SLC16A8O95907 504 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 PROS1P07225 676 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 MTHFD2P13995 350 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 AMD1P17707 334 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 CD1CP29017 333 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 ALDH4A1P30038 563 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 CAPZBP47756 277 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 PNLIPRP1P54315 467 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 CCSMST1Q4G0I0 132 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 PERM1Q5SV97 790 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 PLXDC1Q8IUK5 500 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 ADGRF3Q8IZF5 1079 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 CACTIN-AS1Q8N1I8 211 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 ZNF480Q8WV37 535 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 RHBDF1Q96CC6 855 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 CD180Q99467 661 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 TBC1D10AQ9BXI6 508 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 PCBD2Q9H0N5 130 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 LRRN3Q9H3W5 708 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 CNOT10Q9H9A5 744 aaKnown RBP15.31■□□□□ 0.04
MALAT1-213ENST00000618227 ZNF358Q9NW07 568 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 TMEM216Q9P0N5 145 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 STOX2Q9P2F5 926 aaPredicted RBP15.31■□□□□ 0.04
MALAT1-213ENST00000618227 PDP2Q9P2J9 529 aa15.31■□□□□ 0.04
MALAT1-213ENST00000618227 PTBP2Q9UKA9 531 aaKnown RBP15.31■□□□□ 0.04
MALAT1-213ENST00000618227 OR6C74A6NCV1 312 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 C2orf74A8MZ97 194 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 HMGB1P1B2RPK0 211 aaPredicted RBP15.3■□□□□ 0.04
MALAT1-213ENST00000618227 E7ENX8 843 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 TOX3O15405 576 aaPredicted RBP15.3■□□□□ 0.04
MALAT1-213ENST00000618227 PRPF4O43172 522 aaKnown RBP eCLIP15.3■□□□□ 0.04
MALAT1-213ENST00000618227 PRICKLE3O43900 615 aaPredicted RBP15.3■□□□□ 0.04
MALAT1-213ENST00000618227 PLIN3O60664 434 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 RFPL3O75679 317 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 CPNE6O95741 557 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 SYF2O95926 243 aaKnown RBP15.3■□□□□ 0.04
MALAT1-213ENST00000618227 S100BP04271 92 aaPredicted RBP15.3■□□□□ 0.04
MALAT1-213ENST00000618227 MYF5P13349 255 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 TAC1P20366 129 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 IMPA1P29218 277 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 GMPRP36959 345 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 GLRBP48167 497 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 ALDH18A1P54886 795 aaKnown RBP15.3■□□□□ 0.04
MALAT1-213ENST00000618227 OR1D5P58170 312 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 NAA20P61599 178 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 NFKB2Q00653 900 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 TAP2Q03519 686 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 PRKAA1Q13131 559 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 N4BP2L1Q5TBK1 243 aaPredicted RBP15.3■□□□□ 0.04
MALAT1-213ENST00000618227 ARMC6Q6NXE6 501 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 AGTRAPQ6RW13 159 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 LRRC56Q8IYG6 542 aaPredicted RBP15.3■□□□□ 0.04
MALAT1-213ENST00000618227 C4orf33Q8N1A6 199 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 DEFB124Q8NES8 71 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 OR56A3Q8NH54 315 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 UBTD2Q8WUN7 234 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 CCDC126Q96EE4 140 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 ZDHHC12Q96GR4 267 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 AHCYL2Q96HN2 611 aaKnown RBP15.3■□□□□ 0.04
MALAT1-213ENST00000618227 SCYL1Q96KG9 808 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 ATP6V1G3Q96LB4 118 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 SGPP1Q9BX95 441 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 IQCGQ9H095 443 aaKnown RBP15.3■□□□□ 0.04
MALAT1-213ENST00000618227 HRASLS2Q9NWW9 162 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 CD274Q9NZQ7 290 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 OGFRQ9NZT2 677 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 XPR1Q9UBH6 696 aa15.3■□□□□ 0.04
MALAT1-213ENST00000618227 APOBEC2Q9Y235 224 aaKnown RBP15.3■□□□□ 0.04
MALAT1-213ENST00000618227 TNPO3Q9Y5L0 923 aaKnown RBP15.3■□□□□ 0.04
MALAT1-213ENST00000618227 PIPSLA2A3N6 862 aa15.29■□□□□ 0.04
MALAT1-213ENST00000618227 FOXO6A8MYZ6 492 aa15.29■□□□□ 0.04
MALAT1-213ENST00000618227 STX16-NPEPL1H3BU86 382 aa15.29■□□□□ 0.04
MALAT1-213ENST00000618227 STX16O14662 325 aa15.29■□□□□ 0.04
MALAT1-213ENST00000618227 TM9SF1O15321 606 aa15.29■□□□□ 0.04
MALAT1-213ENST00000618227 SMIM24O75264 130 aa15.29■□□□□ 0.04
MALAT1-213ENST00000618227 C9P02748 559 aa15.29■□□□□ 0.04
MALAT1-213ENST00000618227 PROCP04070 461 aa15.29■□□□□ 0.04
MALAT1-213ENST00000618227 CHRM5P08912 532 aaPredicted RBP15.29■□□□□ 0.04
MALAT1-213ENST00000618227 OAS2P29728 719 aaKnown RBP15.29■□□□□ 0.04
MALAT1-213ENST00000618227 CCL7P80098 99 aa15.29■□□□□ 0.04
MALAT1-213ENST00000618227 NAA25Q14CX7 972 aa15.29■□□□□ 0.04
MALAT1-213ENST00000618227 RSPO4Q2I0M5 234 aaPredicted RBP15.29■□□□□ 0.04
MALAT1-213ENST00000618227 CDHR3Q6ZTQ4 885 aa15.29■□□□□ 0.04
MALAT1-213ENST00000618227 SLC22A9Q8IVM8 553 aa15.29■□□□□ 0.04
MALAT1-213ENST00000618227 SYTL1Q8IYJ3 562 aa15.29■□□□□ 0.04
MALAT1-213ENST00000618227 LINC01555Q8NAE3 123 aa15.29■□□□□ 0.04
MALAT1-213ENST00000618227 OR4D9Q8NGE8 314 aa15.29■□□□□ 0.04
MALAT1-213ENST00000618227 GRAMD1AQ96CP6 724 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms