RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 MEX3DQ86XN8 651 aaKnown RBP6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 RTL3Q8N8U3 475 aaKnown RBP6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 C1orf131Q8NDD1 294 aaKnown RBP6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 MCUQ8NE86 351 aa6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 ZNF397Q8NF99 534 aaPredicted RBP6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 SLC20A1Q8WUM9 679 aa6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 ZNF606Q8WXB4 792 aa6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 SCRN2Q96FV2 425 aa6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 CELF6Q96J87 481 aaKnown RBP6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 MCCC1Q96RQ3 725 aaPredicted RBP6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 SH3GL2Q99962 352 aa6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 TTYH2Q9BSA4 534 aa6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 SCAND2PQ9GZW5 306 aaPredicted RBP6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 SYTL2Q9HCH5 934 aa6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 TXLNGQ9NUQ3 528 aa6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 IMP3Q9NV31 184 aaKnown RBP6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 STAP1Q9ULZ2 295 aa6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 FAM215AQ9Y5M1 114 aa6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.51□□□□□ -1.37
SCAMP1-206ENST00000618166 WNK1Q9H4A3 2382 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 EIF3CLB5ME19 914 aaKnown RBP6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 SYT5O00445 386 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 CHUKO15111 745 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 CYP1A1P04798 512 aaPredicted RBP6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 PDHA1P08559 390 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 KRT5P13647 590 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 CD96P40200 585 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 STC1P52823 247 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 ATP11AP98196 1134 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 AMPD3Q01432 767 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 ENPEPQ07075 957 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 KLC1Q07866 573 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 FASTKQ14296 549 aaKnown RBP6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 OR1C1Q15619 314 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 KHDC1Q4VXA5 237 aaKnown RBP6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 ACBD5Q5T8D3 534 aaPredicted RBP6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 RTL6Q6ICC9 239 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 CNSTQ6PJW8 725 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 NDUFAF7Q7L592 441 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 DAAM2Q86T65 1068 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 TRIM73Q86UV7 250 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 CARFQ8N187 725 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 CCDC185Q8N715 623 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 RELL2Q8NC24 303 aaPredicted RBP6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 OR4E2Q8NGC2 313 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 OR5M9Q8NGP3 310 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 PIGTQ969N2 578 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 KIAA1191Q96A73 305 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 FKBP10Q96AY3 582 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 C1orf159Q96HA4 380 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 KREMEN1Q96MU8 473 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 EIF3CQ99613 913 aaKnown RBP6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 CCL19Q99731 98 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 TIMM29Q9BSF4 260 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 YIPF4Q9BSR8 244 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 CRB3Q9BUF7 120 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 CINPQ9BW66 212 aaPredicted RBP6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 PITPNM3Q9BZ71 974 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 GTPBP4Q9BZE4 634 aaKnown RBP6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 LACRTQ9GZZ8 138 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 WDR54Q9H977 334 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 L2HGDHQ9H9P8 463 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 PNPLA3Q9NST1 481 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 SLC24A2Q9UI40 661 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 AP1M2Q9Y6Q5 423 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 ABCA1O95477 2261 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 ANKRD12Q6UB98 2062 aa6.5□□□□□ -1.37
SCAMP1-206ENST00000618166 PVALEFA0A1B0GWK0 134 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 TUBAL3A6NHL2 446 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 A8MUI8 341 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 BTN3A3O00478 584 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 KMOO15229 486 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 VEGFDO43915 354 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 HS6ST1O60243 411 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 CLDN7O95471 211 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 MYBL2P10244 700 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 HLA-DPA1P20036 260 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 PRDX3P30048 256 aaKnown RBP6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 HALP42357 657 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 OR1D4P47884 311 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 AP1S1P61966 158 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 SLC25A35Q3KQZ1 300 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 PARP15Q460N3 678 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 C2CD6Q53TS8 623 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 CMPK2Q5EBM0 449 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 HENMT1Q5T8I9 393 aaKnown RBP6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 ARHGEF18Q6ZSZ5 1173 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 TTLL10Q6ZVT0 673 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 IL17RELQ6ZVW7 336 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 LRRTM4Q86VH4 590 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 ARIH2OSQ8N7S6 290 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 PIH1D2Q8WWB5 315 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 N4BP2L2Q92802 583 aaPredicted RBP6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 NPAS2Q99743 824 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 SARGQ9BW04 601 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 BEX2Q9BXY8 128 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 SLC26A1Q9H2B4 701 aa6.49□□□□□ -1.37
SCAMP1-206ENST00000618166 CATSPERBQ9H7T0 1116 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms