RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 SEMA4GQ9NTN9 838 aa10.67□□□□□ -0.7
POLR2A-209ENST00000617998 NUDT4Q9NZJ9 180 aa10.67□□□□□ -0.7
POLR2A-209ENST00000617998 TCAF1Q9Y4C2 921 aa10.67□□□□□ -0.7
POLR2A-209ENST00000617998 WWP2O00308 870 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 EIF2DP41214 584 aaKnown RBP10.66□□□□□ -0.7
POLR2A-209ENST00000617998 HERC3Q15034 1050 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 INO80DQ53TQ3 878 aaPredicted RBP10.66□□□□□ -0.7
POLR2A-209ENST00000617998 RBMS3Q6XE24 437 aaKnown RBP10.66□□□□□ -0.7
POLR2A-209ENST00000617998 PANX1Q96RD7 426 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 FNDC11Q9BVV2 318 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 CALML5Q9NZT1 146 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.66□□□□□ -0.7
POLR2A-209ENST00000617998 hCG_1818297A0A087WSY0 165 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 LOC100653049A0A140TA62 436 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 CAPN5O15484 640 aaPredicted RBP10.66□□□□□ -0.7
POLR2A-209ENST00000617998 MGRN1O60291 552 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 KRT34O76011 436 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 ALBP02768 609 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 SERPINB5P36952 375 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 CPXM2Q8N436 756 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 TMIEQ8NEW7 156 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 CMTM7Q96FZ5 175 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 C1orf74Q96LT6 269 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 ALS2Q96Q42 1657 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 IL32P24001 234 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 NCBP2P52298 156 aaKnown RBP eCLIP10.66□□□□□ -0.74e-14■□□□□ 9.2
POLR2A-209ENST00000617998 ENPP2Q13822 863 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 STK11Q15831 433 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 ZNF605Q86T29 641 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 ATG16L2Q8NAA4 619 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 TEFMQ96QE5 360 aaKnown RBP10.66□□□□□ -0.7
POLR2A-209ENST00000617998 LRRC1Q9BTT6 524 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 EFCAB11Q9BUY7 163 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 ROPN1BQ9BZX4 212 aaPredicted RBP10.66□□□□□ -0.7
POLR2A-209ENST00000617998 ROPN1Q9HAT0 212 aaPredicted RBP10.66□□□□□ -0.7
POLR2A-209ENST00000617998 TAAR2Q9P1P5 351 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 MSX1P28360 303 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 IRX1P78414 480 aaPredicted RBP10.66□□□□□ -0.7
POLR2A-209ENST00000617998 RSPO4Q2I0M5 234 aaPredicted RBP10.66□□□□□ -0.7
POLR2A-209ENST00000617998 DEFB110Q30KQ9 67 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 HLA-BQ31612 363 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 RNASEH2BQ5TBB1 312 aaKnown RBP10.66□□□□□ -0.7
POLR2A-209ENST00000617998 GALNT18Q6P9A2 607 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 MT-CO3P00414 261 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 GP1BBP13224 206 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 USP30Q70CQ3 517 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 CHST14Q8NCH0 376 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 ELF4Q99607 663 aaPredicted RBP10.66□□□□□ -0.7
POLR2A-209ENST00000617998 TLR10Q9BXR5 811 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 SPEF1Q9Y4P9 236 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 PEX11AO75192 247 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 PLCXD2Q0VAA5 305 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 GBX1Q14549 363 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 SF3A2Q15428 464 aaKnown RBP10.66□□□□□ -0.7
POLR2A-209ENST00000617998 CPNE9Q8IYJ1 553 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 TEKT5Q96M29 485 aa10.66□□□□□ -0.7
POLR2A-209ENST00000617998 EXOSC4Q9NPD3 245 aaKnown RBP10.66□□□□□ -0.7
POLR2A-209ENST00000617998 IGKV6D-21A0A0A0MT36 114 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 ELOA3DA6NLF2 546 aaPredicted RBP10.65□□□□□ -0.7
POLR2A-209ENST00000617998 ZNF891A8MT65 544 aaPredicted RBP10.65□□□□□ -0.7
POLR2A-209ENST00000617998 NPIPA2E9PIF3 369 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 NPIPA3F8WFD2 350 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 CPNE3O75131 537 aaKnown RBP10.65□□□□□ -0.7
POLR2A-209ENST00000617998 TARSP26639 723 aaKnown RBP10.65□□□□□ -0.7
POLR2A-209ENST00000617998 EEF1A2Q05639 463 aaKnown RBP10.65□□□□□ -0.7
POLR2A-209ENST00000617998 KLC1Q07866 573 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 SMAD2Q15796 467 aaKnown RBP10.65□□□□□ -0.7
POLR2A-209ENST00000617998 ELOA3BQ3SY89 546 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 FGD2Q7Z6J4 655 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 ELOA3Q8NG57 546 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 NSMCE3Q96MG7 304 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 IP6K3Q96PC2 410 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 CASP8AP2Q9UKL3 1982 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 FBXO4Q9UKT5 387 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 NDUFAF1Q9Y375 327 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 TELO2Q9Y4R8 837 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 IGKV6-21A0A0C4DH24 114 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 PRSS38A1L453 326 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 H0YC42 278 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 ATP5F1P24539 256 aaPredicted RBP10.65□□□□□ -0.7
POLR2A-209ENST00000617998 PPP2R2AP63151 447 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 STPG1Q5TH74 334 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 FIGLAQ6QHK4 219 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 TMEM110Q86TL2 294 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 GPR65Q8IYL9 337 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 PHOSPHO1Q8TCT1 267 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 SMOC1Q9H4F8 434 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 SAP18O00422 153 aaKnown RBP10.65□□□□□ -0.7
POLR2A-209ENST00000617998 HLA-DQB2P05538 268 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 SRCP12931 536 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 SMIM11AP58511 58 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 SEMA5AQ13591 1074 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 IRF4Q15306 451 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 TMEM201Q5SNT2 666 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 RASSF6Q6ZTQ3 369 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 MFSD2AQ8NA29 543 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 FGF14Q92915 247 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 MUCL1Q96DR8 90 aa10.65□□□□□ -0.7
POLR2A-209ENST00000617998 KCTD14Q9BQ13 255 aaPredicted RBP10.65□□□□□ -0.7
POLR2A-209ENST00000617998 ACTL8Q9H568 366 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms