RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 ST13P4Q8IZP2 240 aaPredicted RBP20.06■□□□□ 0.8
CNTNAP3B-212ENST00000617422 PYDC1Q8WXC3 89 aa20.06■□□□□ 0.8
CNTNAP3B-212ENST00000617422 ZNF514Q96K75 400 aaPredicted RBP20.06■□□□□ 0.8
CNTNAP3B-212ENST00000617422 C1orf50Q9BV19 199 aa20.06■□□□□ 0.8
CNTNAP3B-212ENST00000617422 STOX2Q9P2F5 926 aaPredicted RBP20.06■□□□□ 0.8
CNTNAP3B-212ENST00000617422 GPR45Q9Y5Y3 372 aa20.06■□□□□ 0.8
CNTNAP3B-212ENST00000617422 MGAT4DA6NG13 374 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 C1orf105O95561 183 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 EBLN1P0CF75 366 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 DSELQ8IZU8 1212 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 FBXW8Q8N3Y1 598 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 SIPA1Q96FS4 1042 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 TEX37Q96LM6 180 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 SLC17A9Q9BYT1 436 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 SDR39U1Q9NRG7 319 aaPredicted RBP20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 C17orf113A0A1B0GUU1 675 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 VPS4BO75351 444 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 ZCCHC18P0CG32 403 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 UQCRBP14927 111 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 NDUFV2P19404 249 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 IMPA1P29218 277 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 HMOX2P30519 316 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 DPP6P42658 865 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 ERFP50548 548 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 TFF2Q03403 129 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 MED21Q13503 144 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 SKIV2LQ15477 1246 aaKnown RBP20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 OR4K3Q96R72 315 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 MYOCQ99972 504 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 KLQ9UEF7 1012 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 TRPS1Q9UHF7 1281 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 PACSIN3Q9UKS6 424 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 POMPQ9Y244 141 aa20.05■□□□□ 0.8
CNTNAP3B-212ENST00000617422 KCNE1BA0A087WTH5 132 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 LSM1O15116 133 aaKnown RBP20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 PEX1O43933 1283 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 PDE5AO76074 875 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 CATP04040 527 aaKnown RBP20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 MAP4P27816 1152 aaKnown RBP20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 ACADLP28330 430 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 IGFALSP35858 605 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 POLE2P56282 527 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 CPSF6Q16630 551 aaKnown RBP eCLIP20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 KIF19Q2TAC6 998 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 AGTRAPQ6RW13 159 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 KYQ8NBH2 561 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 HM13Q8TCT9 377 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 OR52A5Q9H2C5 316 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 WDR26Q9H7D7 661 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 FBRSQ9HAH7 460 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 TBC1D3DA0A087WVF3 549 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 TBC1D3IA0A087WXS9 549 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 TBC1D3EA0A087X179 549 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 TBC1D3KA0A087X1G2 549 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 TBC1D3FA6NER0 549 aaPredicted RBP20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 TBC1D3LB9A6J9 549 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 CLDN9O95484 217 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 TBC1D3HP0C7X1 549 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 C7P10643 843 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 ZFP36L2P47974 494 aaKnown RBP20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 SGO1Q5FBB7 561 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 TBC1D3GQ6DHY5 549 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 TBC1D3CQ6IPX1 549 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 TRMT11Q7Z4G4 463 aaKnown RBP20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 HORMAD1Q86X24 394 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 TBC1D3Q8IZP1 549 aaPredicted RBP20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 FAM3CQ92520 227 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 ZDHHC5Q9C0B5 715 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 ACTR8Q9H981 624 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 DNAJC11Q9NVH1 559 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 AIG1Q9NVV5 245 aa20.04■□□□□ 0.8
CNTNAP3B-212ENST00000617422 MANBAO00462 879 aa20.03■□□□□ 0.8
CNTNAP3B-212ENST00000617422 CASQ2O14958 399 aaPredicted RBP20.03■□□□□ 0.8
CNTNAP3B-212ENST00000617422 ACADVLP49748 655 aa20.03■□□□□ 0.8
CNTNAP3B-212ENST00000617422 HMGCS1Q01581 520 aa20.03■□□□□ 0.8
CNTNAP3B-212ENST00000617422 TBL3Q12788 808 aaKnown RBP20.03■□□□□ 0.8
CNTNAP3B-212ENST00000617422 SGCGQ13326 291 aa20.03■□□□□ 0.8
CNTNAP3B-212ENST00000617422 NAE1Q13564 534 aa20.03■□□□□ 0.8
CNTNAP3B-212ENST00000617422 RFTN2Q52LD8 501 aaPredicted RBP20.03■□□□□ 0.8
CNTNAP3B-212ENST00000617422 KIAA1161Q6NSJ0 714 aa20.03■□□□□ 0.8
CNTNAP3B-212ENST00000617422 TTC23LQ6PF05 361 aa20.03■□□□□ 0.8
CNTNAP3B-212ENST00000617422 Q6ZS52 159 aa20.03■□□□□ 0.8
CNTNAP3B-212ENST00000617422 MTFMTQ96DP5 389 aaKnown RBP20.03■□□□□ 0.8
CNTNAP3B-212ENST00000617422 CCDC138Q96M89 665 aa20.03■□□□□ 0.8
CNTNAP3B-212ENST00000617422 NRTNQ99748 197 aa20.03■□□□□ 0.8
CNTNAP3B-212ENST00000617422 COL6A3P12111 3177 aa20.03■□□□□ 0.8
CNTNAP3B-212ENST00000617422 A0A1W2PPC1 479 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 PABPN1LA6NDY0 278 aaKnown RBP20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 SLC31A1O15431 190 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 SNRPB2P08579 225 aaKnown RBP20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 CD22P20273 847 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 ACSL1P33121 698 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 MTTPP55157 894 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 ERVK-8P63133 956 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 Q7L0L9 218 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 LRRTM4Q86VH4 590 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 AMZ2Q86W34 360 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 THOC6Q86W42 341 aaKnown RBP20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 MIER2Q8N344 545 aa20.02■□□□□ 0.8
CNTNAP3B-212ENST00000617422 ZNF480Q8WV37 535 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms