RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 PPP2R2BQ00005 443 aa13.12□□□□□ -0.31
PCDHA11-202ENST00000616325 HMGCS1Q01581 520 aa13.12□□□□□ -0.31
PCDHA11-202ENST00000616325 SLAMF1Q13291 335 aa13.12□□□□□ -0.31
PCDHA11-202ENST00000616325 GPR162Q16538 588 aa13.12□□□□□ -0.31
PCDHA11-202ENST00000616325 TIGD6Q17RP2 521 aa13.12□□□□□ -0.31
PCDHA11-202ENST00000616325 NECAB2Q7Z6G3 386 aa13.12□□□□□ -0.31
PCDHA11-202ENST00000616325 BPHLQ86WA6 291 aaPredicted RBP13.12□□□□□ -0.31
PCDHA11-202ENST00000616325 HIPK1Q86Z02 1210 aa13.12□□□□□ -0.31
PCDHA11-202ENST00000616325 TTC29Q8NA56 475 aaPredicted RBP13.12□□□□□ -0.31
PCDHA11-202ENST00000616325 OR7D4Q8NG98 312 aa13.12□□□□□ -0.31
PCDHA11-202ENST00000616325 TRIM63Q969Q1 353 aa13.12□□□□□ -0.31
PCDHA11-202ENST00000616325 PDP1Q9P0J1 537 aaPredicted RBP13.12□□□□□ -0.31
PCDHA11-202ENST00000616325 PKP3Q9Y446 797 aa13.12□□□□□ -0.31
PCDHA11-202ENST00000616325 TYW5A2RUC4 315 aaKnown RBP13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 CXCR6O00574 342 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 HAT1O14929 419 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 EFNA1P20827 205 aaPredicted RBP13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 RPL38P63173 70 aaKnown RBP13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 LCP2Q13094 533 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 ACOX1Q15067 660 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 IRAK1BP1Q5VVH5 260 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 GLT6D1Q7Z4J2 308 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 HORMAD1Q86X24 394 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 FAM217AQ8IXS0 508 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 SETD9Q8NE22 299 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 OR2T11Q8NH01 316 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 PROKR1Q8TCW9 393 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 TP53INP1Q96A56 240 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 YIPF6Q96EC8 236 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 COPS4Q9BT78 406 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 TSPAN9O75954 239 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 MTHFD2P13995 350 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 OR1G1P47890 313 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 MVKQ03426 396 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 RAD51Q06609 339 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 LRRC26Q2I0M4 334 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 ZNF648Q5T619 568 aaPredicted RBP13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 LINGO4Q6UY18 593 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 STAG3L4Q8TBR4 150 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 EEF1AKMT1Q8WVE0 214 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 LINGO1Q96FE5 620 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 MED30Q96HR3 178 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 RTP3Q9BQQ7 232 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 MUC13Q9H3R2 512 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 POLR3BQ9NW08 1133 aaPredicted RBP13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 TAS2R13Q9NYV9 303 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 NOD1Q9Y239 953 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 ELOVL7A1L3X0 281 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 SMIM30A4D0T7 59 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 UPK3BL1B0FP48 263 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 UPK3BL2E5RIL1 263 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 CBX4O00257 560 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 SCO2O43819 266 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 EEDO75530 441 aaKnown RBP13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 MATN4O95460 622 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 UQCRC1P31930 480 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 IL12RB1P42701 662 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 CTSKP43235 329 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 CBX2Q14781 532 aaPredicted RBP13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 CCDC85BQ15834 202 aaPredicted RBP13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 MAPKAPK3Q16644 382 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 TYSND1Q2T9J0 566 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 C6orf136Q5SQH8 315 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 RGMBQ6NW40 437 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 KDELC1Q6UW63 502 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 AGMOQ6ZNB7 445 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 SCD5Q86SK9 330 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 CCDC28AQ8IWP9 274 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 PGBD5Q8N414 524 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 APOL4Q9BPW4 351 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 IKZF5Q9H5V7 419 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 AASDHPPTQ9NRN7 309 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 AIG1Q9NVV5 245 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 UCKL1Q9NWZ5 548 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 ZNF451Q9Y4E5 1061 aa13.11□□□□□ -0.31
PCDHA11-202ENST00000616325 ERVH48-1M5A8F1 160 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 FGF10O15520 208 aaPredicted RBP13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 ARHGEF9O43307 516 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 TNFRSF21O75509 655 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 LRATO95237 230 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 FHP07954 510 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 IRF1P10914 325 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 DGKEP52429 567 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 FOXM1Q08050 763 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 FAM174BQ3ZCQ3 159 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 PXDC1Q5TGL8 231 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 FBXL22Q6P050 247 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 PHYKPLQ8IUZ5 450 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 THEM5Q8N1Q8 247 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 SPERTQ8NA61 448 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 OR5K1Q8NHB7 308 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 FAM120BQ96EK7 910 aaKnown RBP13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 ZNF583Q96ND8 569 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 FBXO9Q9UK97 447 aaPredicted RBP13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 PABPN1LA6NDY0 278 aaKnown RBP13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 LDB2O43679 373 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 F2P00734 622 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 NTRK1P04629 796 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 CBLP22681 906 aa13.1□□□□□ -0.31
PCDHA11-202ENST00000616325 CRYBB1P53674 252 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms