RNA–Protein interactions for RNA: ENST00000612482.4

SREBF2-209, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 5 BASIC

Gene SREBF2, Length 5,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-209ENST00000612482 CLIC1O00299 241 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 TPD52L2O43399 206 aaKnown RBP18.79■□□□□ 0.6
SREBF2-209ENST00000612482 OPN1SWP03999 348 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 ATF6P18850 670 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 PRKCHP24723 683 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 STXBP1P61764 594 aaKnown RBP18.79■□□□□ 0.6
SREBF2-209ENST00000612482 KIAA1161Q6NSJ0 714 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 OXCT2Q9BYC2 517 aaPredicted RBP18.79■□□□□ 0.6
SREBF2-209ENST00000612482 CFL2Q9Y281 166 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 J3QRK9 145 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 ENGP17813 658 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 PRPS1L1P21108 318 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 AVPR1BP47901 424 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 GSK3BP49841 420 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 CRB2Q5IJ48 1285 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 EPGNQ6UW88 154 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 LRP10Q7Z4F1 713 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 NKD1Q969G9 470 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 ARMC5Q96C12 935 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 EFHD2Q96C19 240 aaPredicted RBP18.79■□□□□ 0.6
SREBF2-209ENST00000612482 FBXL8Q96CD0 374 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 SIPA1Q96FS4 1042 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 SLC22A4Q9H015 551 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 GALPQ9UBC7 116 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 FZD4Q9ULV1 537 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 FKBP7Q9Y680 259 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 SLIT3O75094 1523 aa18.79■□□□□ 0.6
SREBF2-209ENST00000612482 TBX18O95935 607 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 AHSGP02765 367 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 PRKCGP05129 697 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 XKP51811 444 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 CRISP3P54108 245 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 PPP3R1P63098 170 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 OR2L5Q8NG80 312 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 C12orf4Q9NQ89 552 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 SLC2A6Q9UGQ3 507 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 TEX264Q9Y6I9 313 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 TSPAN5P62079 268 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 THOC7Q6I9Y2 204 aaKnown RBP18.78■□□□□ 0.6
SREBF2-209ENST00000612482 GET4Q7L5D6 327 aaPredicted RBP18.78■□□□□ 0.6
SREBF2-209ENST00000612482 PIM3Q86V86 326 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 CAND1Q86VP6 1230 aaKnown RBP18.78■□□□□ 0.6
SREBF2-209ENST00000612482 IQCHQ86VS3 1027 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 ZC3HC1Q86WB0 502 aaKnown RBP18.78■□□□□ 0.6
SREBF2-209ENST00000612482 CPA6Q8N4T0 437 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 COX18Q8N8Q8 333 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 OR9I1Q8NGQ6 314 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 C1orf21Q9H246 121 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 MSRAQ9UJ68 235 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 PLIN4Q96Q06 1357 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 NFATC1O95644 943 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 DDX6P26196 483 aaKnown RBP eCLIP18.78■□□□□ 0.62e-10■■■□□ 17.8
SREBF2-209ENST00000612482 RAB15P59190 212 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 TIGD5Q53EQ6 642 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 MINDY2Q8NBR6 621 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 PLEKHA1Q9HB21 404 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 UCKL1Q9NWZ5 548 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 WRBO00258 174 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 KCNA5P22460 613 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 CLEC12AQ5QGZ9 265 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 YTHDF1Q9BYJ9 559 aaKnown RBP18.78■□□□□ 0.6
SREBF2-209ENST00000612482 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.78■□□□□ 0.61e-7■■■□□ 18.6
SREBF2-209ENST00000612482 MED31Q9Y3C7 131 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 GNB5O14775 395 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 ALPPP05187 535 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 SLC2A2P11168 524 aaPredicted RBP18.78■□□□□ 0.6
SREBF2-209ENST00000612482 PDHA2P29803 388 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 SIRPB2Q5JXA9 342 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 OR4F3Q6IEY1 312 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 PRSS55Q6UWB4 352 aaPredicted RBP18.78■□□□□ 0.6
SREBF2-209ENST00000612482 PDSS2Q86YH6 399 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 LRRC20Q8TCA0 184 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 ERMAPQ96PL5 475 aaPredicted RBP18.78■□□□□ 0.6
SREBF2-209ENST00000612482 CST11Q9H112 138 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 UPB1Q9UBR1 384 aa18.78■□□□□ 0.6
SREBF2-209ENST00000612482 NEURL4Q96JN8 1562 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 A0A0G2JN53 185 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 PI15O43692 258 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 PRAMEF12O95522 483 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 VARSP26640 1264 aaKnown RBP18.77■□□□□ 0.6
SREBF2-209ENST00000612482 SLC6A4P31645 630 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 C1QTNF8P60827 252 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 RPS24P62847 133 aaKnown RBP18.77■□□□□ 0.6
SREBF2-209ENST00000612482 OGDHQ02218 1023 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 SLC18A2Q05940 514 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 SFT2D3Q587I9 215 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 ZCCHC12Q6PEW1 402 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 TMEM203Q969S6 136 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 CDKN2AIPNLQ96HQ2 116 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 TLR6Q9Y2C9 796 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 IFI30P13284 250 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 NCBP2P52298 156 aaKnown RBP eCLIP18.77■□□□□ 0.67e-22■□□□□ 10.8
SREBF2-209ENST00000612482 PITPNAQ00169 270 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 ASB18Q6ZVZ8 466 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 OR5AK3PQ8NH89 298 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 DEFB118Q96PH6 123 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 GAL3ST4Q96RP7 486 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 OR2AG1Q9H205 316 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 ZIM2Q9NZV7 527 aa18.77■□□□□ 0.6
SREBF2-209ENST00000612482 VPS29Q9UBQ0 182 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms