RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 GPC4O75487 556 aa17.1■□□□□ 0.33
SSBP1-215ENST00000612337 IFNB1P01574 187 aa17.1■□□□□ 0.33
SSBP1-215ENST00000612337 RPN2P04844 631 aa17.1■□□□□ 0.33
SSBP1-215ENST00000612337 HSPA14Q0VDF9 509 aa17.1■□□□□ 0.33
SSBP1-215ENST00000612337 MYBPC3Q14896 1274 aa17.1■□□□□ 0.33
SSBP1-215ENST00000612337 NKAIN1Q4KMZ8 207 aa17.1■□□□□ 0.33
SSBP1-215ENST00000612337 SEL1L2Q5TEA6 688 aa17.1■□□□□ 0.33
SSBP1-215ENST00000612337 GAS2L3Q86XJ1 694 aa17.1■□□□□ 0.33
SSBP1-215ENST00000612337 VRK3Q8IV63 474 aa17.1■□□□□ 0.33
SSBP1-215ENST00000612337 GALNT16Q8N428 558 aa17.1■□□□□ 0.33
SSBP1-215ENST00000612337 LINC01555Q8NAE3 123 aa17.1■□□□□ 0.33
SSBP1-215ENST00000612337 CASS4Q9NQ75 786 aa17.1■□□□□ 0.33
SSBP1-215ENST00000612337 P4HTMQ9NXG6 502 aa17.1■□□□□ 0.33
SSBP1-215ENST00000612337 TCAF1Q9Y4C2 921 aa17.1■□□□□ 0.33
SSBP1-215ENST00000612337 CENPEQ02224 2701 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 TCP11X1B4DZS4 312 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 SEMA7AO75326 666 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 ALPPP05187 535 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 MAGP20916 626 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 GCGRP47871 477 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 PRAMEP78395 509 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 SEMA3AQ14563 771 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 SLC9A5Q14940 896 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 AARS2Q5JTZ9 985 aaKnown RBP17.09■□□□□ 0.33
SSBP1-215ENST00000612337 UNC5DQ6UXZ4 953 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 PPP1R32Q7Z5V6 425 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 DCUN1D3Q8IWE4 304 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 FAM20CQ8IXL6 584 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 RNF10Q8N5U6 811 aaKnown RBP17.09■□□□□ 0.33
SSBP1-215ENST00000612337 LKAAEAR1Q8TD35 194 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 SSC4DQ8WTU2 575 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 DLG3Q92796 817 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 SLC22A18Q96BI1 424 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 RAB6BQ9NRW1 208 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 CUEDC1Q9NWM3 386 aaPredicted RBP17.09■□□□□ 0.33
SSBP1-215ENST00000612337 ZNF148Q9UQR1 794 aa17.09■□□□□ 0.33
SSBP1-215ENST00000612337 DOPEY1Q5JWR5 2465 aa17.08■□□□□ 0.33
SSBP1-215ENST00000612337 PCM1Q15154 2024 aa17.08■□□□□ 0.33
SSBP1-215ENST00000612337 SLCO2B1O94956 709 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 S1PR4O95977 384 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 APOA4P06727 396 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 UMODP07911 640 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 CD9P21926 228 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 ARSFP54793 590 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 SOX8P57073 446 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 GRB7Q14451 532 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 C4orf17Q53FE4 359 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 IGFL3Q6UXB1 125 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 SLC13A5Q86YT5 568 aaPredicted RBP17.08■□□□□ 0.32
SSBP1-215ENST00000612337 MCATQ8IVS2 390 aaKnown RBP17.08■□□□□ 0.32
SSBP1-215ENST00000612337 PPHLN1Q8NEY8 458 aaKnown RBP17.08■□□□□ 0.32
SSBP1-215ENST00000612337 CFAP61Q8NHU2 1237 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 DENND1AQ8TEH3 1009 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 UBE2Q2Q8WVN8 375 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 C1orf54Q8WWF1 131 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 NACC2Q96BF6 587 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 ZNF552Q9H707 407 aaPredicted RBP17.08■□□□□ 0.32
SSBP1-215ENST00000612337 SLC22A11Q9NSA0 550 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 MAP10Q9P2G4 905 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 PLEKHB1Q9UF11 243 aaPredicted RBP17.08■□□□□ 0.32
SSBP1-215ENST00000612337 ANAPC5Q9UJX4 755 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 B3GNT3Q9Y2A9 372 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 KLHL20Q9Y2M5 609 aa17.08■□□□□ 0.32
SSBP1-215ENST00000612337 A0A1B0GX78 115 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 IQCF5A8MTL0 148 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 PRMT5O14744 637 aaPredicted RBP17.07■□□□□ 0.32
SSBP1-215ENST00000612337 IPO13O94829 963 aaKnown RBP17.07■□□□□ 0.32
SSBP1-215ENST00000612337 ONECUT2O95948 504 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 APRTP07741 180 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 ETS1P14921 441 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 ALAS2P22557 587 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 AOAHP28039 575 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 TTPAP49638 278 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 FOXL2P58012 376 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 MRPL49Q13405 166 aaKnown RBP17.07■□□□□ 0.32
SSBP1-215ENST00000612337 CYP2A13Q16696 494 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 EIF2S3LQ2VIR3 472 aaKnown RBP17.07■□□□□ 0.32
SSBP1-215ENST00000612337 PLEKHN1Q494U1 663 aaPredicted RBP17.07■□□□□ 0.32
SSBP1-215ENST00000612337 TTLL10Q6ZVT0 673 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 PRUNE1Q86TP1 453 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 TAX1BP1Q86VP1 789 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 IQCKQ8N0W5 287 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 C2orf73Q8N5S3 287 aaPredicted RBP17.07■□□□□ 0.32
SSBP1-215ENST00000612337 CCDC89Q8N998 374 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 OR2L8Q8NGY9 312 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 FKBP10Q96AY3 582 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 IL17FQ96PD4 163 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 ENAMQ9NRM1 1142 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 CATSPERZQ9NTU4 200 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 INTS7Q9NVH2 962 aaKnown RBP17.07■□□□□ 0.32
SSBP1-215ENST00000612337 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.07■□□□□ 0.32
SSBP1-215ENST00000612337 PAK5Q9P286 719 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 CIDEBQ9UHD4 219 aa17.07■□□□□ 0.32
SSBP1-215ENST00000612337 NUP210LQ5VU65 1888 aa17.06■□□□□ 0.32
SSBP1-215ENST00000612337 RASGRF2O14827 1237 aa17.06■□□□□ 0.32
SSBP1-215ENST00000612337 FKBP9O95302 570 aa17.06■□□□□ 0.32
SSBP1-215ENST00000612337 ALBP02768 609 aa17.06■□□□□ 0.32
SSBP1-215ENST00000612337 ITGAXP20702 1163 aa17.06■□□□□ 0.32
SSBP1-215ENST00000612337 TMED2Q15363 201 aa17.06■□□□□ 0.32
SSBP1-215ENST00000612337 PCID2Q5JVF3 399 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms