RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CDC20Q12834 499 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 ILF2Q12905 390 aaKnown RBP11.91□□□□□ -0.5
CBWD3-208ENST00000612050 SRSF6Q13247 344 aaKnown RBP11.91□□□□□ -0.5
CBWD3-208ENST00000612050 DNASE1L3Q13609 305 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 KCTD19Q17RG1 926 aaPredicted RBP11.91□□□□□ -0.5
CBWD3-208ENST00000612050 KLHL38Q2WGJ6 581 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 CRTC2Q53ET0 693 aaPredicted RBP11.91□□□□□ -0.5
CBWD3-208ENST00000612050 FBXO38Q6PIJ6 1188 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 DENND6AQ8IWF6 608 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 TTC9Q92623 222 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 INPP5DQ92835 1189 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 CERS2Q96G23 380 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 MED8Q96G25 268 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 CFAP36Q96G28 342 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 LRFN5Q96NI6 719 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 OR2A14Q96R47 310 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 CHRNA10Q9GZZ6 450 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 KLHL25Q9H0H3 589 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 RAB17Q9H0T7 212 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 TAS2R13Q9NYV9 303 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 IL1RAPL1Q9NZN1 696 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 GPN3Q9UHW5 284 aaPredicted RBP11.91□□□□□ -0.5
CBWD3-208ENST00000612050 CORO1CQ9ULV4 474 aaPredicted RBP11.91□□□□□ -0.5
CBWD3-208ENST00000612050 PADI2Q9Y2J8 665 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 UTP11Q9Y3A2 253 aaKnown RBP11.91□□□□□ -0.5
CBWD3-208ENST00000612050 PTPRQQ9UMZ3 2332 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 EIF3FO00303 357 aaPredicted RBP11.9□□□□□ -0.5
CBWD3-208ENST00000612050 CCNDBP1O95273 360 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 SYF2O95926 243 aaKnown RBP11.9□□□□□ -0.5
CBWD3-208ENST00000612050 MPC1LP0DKB6 136 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 PVRP15151 417 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 CMPK1P30085 196 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 RPA3P35244 121 aaPredicted RBP11.9□□□□□ -0.5
CBWD3-208ENST00000612050 BDKRB1P46663 353 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 TSTA3Q13630 321 aaPredicted RBP11.9□□□□□ -0.5
CBWD3-208ENST00000612050 HIBCHQ6NVY1 386 aaPredicted RBP11.9□□□□□ -0.5
CBWD3-208ENST00000612050 TLDC1Q6P9B6 456 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 SYT10Q6XYQ8 523 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 TAX1BP1Q86VP1 789 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 OR9A1PQ8NGU1 263 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 DLG3Q92796 817 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 EXTL1Q92935 676 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 TRIM51Q9BSJ1 452 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 NDC1Q9BTX1 674 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 SLC12A9Q9BXP2 914 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 ADNPQ9H2P0 1102 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 NSMCE4AQ9NXX6 385 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 ZFATQ9P243 1243 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 PLCL2Q9UPR0 1127 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 CHMP2BQ9UQN3 213 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 POLHQ9Y253 713 aa11.9□□□□□ -0.5
CBWD3-208ENST00000612050 HEMK1Q9Y5R4 338 aaPredicted RBP11.9□□□□□ -0.5
CBWD3-208ENST00000612050 ZZEF1O43149 2961 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 MEN1O00255 615 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 CREG1O75629 220 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 SEC31AO94979 1220 aaKnown RBP11.89□□□□□ -0.51
CBWD3-208ENST00000612050 MATN4O95460 622 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 RECKO95980 971 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 HIST1H2AGP0C0S8 130 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-208ENST00000612050 ERVK-10P10266 1014 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 PIM1P11309 404 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-208ENST00000612050 HIST1H2ADP20671 130 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 ELK3P41970 407 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 ARSFP54793 590 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 CYP4F2P78329 520 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 PDIA2Q13087 525 aaKnown RBP11.89□□□□□ -0.51
CBWD3-208ENST00000612050 ARHGAP19Q14CB8 494 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 TCTE1Q5JU00 501 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 CDHR3Q6ZTQ4 885 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 SYVN1Q86TM6 617 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 TRIM73Q86UV7 250 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 MYO1HQ8N1T3 1032 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 C2orf73Q8N5S3 287 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-208ENST00000612050 C2CD4AQ8NCU7 369 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-208ENST00000612050 SPATA4Q8NEY3 305 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 CT55Q8WUE5 264 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 APOBEC4Q8WW27 367 aaKnown RBP11.89□□□□□ -0.51
CBWD3-208ENST00000612050 CDKL2Q92772 493 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 ZUFSPQ96AP4 578 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 HIST1H2AHQ96KK5 128 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 PPM1MQ96MI6 270 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 HIST1H2AJQ99878 128 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 TRIM56Q9BRZ2 755 aaKnown RBP11.89□□□□□ -0.51
CBWD3-208ENST00000612050 H2AFJQ9BTM1 129 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 TRIM54Q9BYV2 358 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 TWSG1Q9GZX9 223 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 SPHK1Q9NYA1 384 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 TXNDC16Q9P2K2 825 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 G3BP2Q9UN86 482 aaKnown RBP11.89□□□□□ -0.51
CBWD3-208ENST00000612050 DHRS7Q9Y394 339 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 PCDHGA6Q9Y5G7 932 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 NFS1Q9Y697 457 aa11.89□□□□□ -0.51
CBWD3-208ENST00000612050 DSPP15924 2871 aaKnown RBP11.89□□□□□ -0.51
CBWD3-208ENST00000612050 AHCTF1Q8WYP5 2266 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 TARM1B6A8C7 271 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 ZSCAN9O15535 394 aaPredicted RBP11.88□□□□□ -0.51
CBWD3-208ENST00000612050 PSIP1O75475 530 aaKnown RBP11.88□□□□□ -0.51
CBWD3-208ENST00000612050 TIAF1O95411 115 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 MAGP20916 626 aa11.88□□□□□ -0.51
CBWD3-208ENST00000612050 PTPN4P29074 926 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms