RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 CDYLQ9Y232 598 aa18.53■□□□□ 0.56
CTSA-217ENST00000607482 KCNMB2Q9Y691 235 aa18.53■□□□□ 0.56
CTSA-217ENST00000607482 GCN1Q92616 2671 aaKnown RBP18.52■□□□□ 0.56
CTSA-217ENST00000607482 TERTO14746 1132 aaKnown RBP18.52■□□□□ 0.56
CTSA-217ENST00000607482 RFPL1O75677 317 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 TMEM63AO94886 807 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 PKMP14618 531 aaKnown RBP18.52■□□□□ 0.56
CTSA-217ENST00000607482 ARNTP27540 789 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 GNG11P61952 73 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 UGT8Q16880 541 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 LONRF1Q17RB8 773 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 PTCHD3Q3KNS1 767 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 LACTB2Q53H82 288 aaPredicted RBP18.52■□□□□ 0.56
CTSA-217ENST00000607482 CTSL3PQ5NE16 218 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 IZUMO3Q5VZ72 239 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 PCGF5Q86SE9 256 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 TMEM135Q86UB9 458 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 CILP2Q8IUL8 1156 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 OR2L8Q8NGY9 312 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 ABHD17AQ96GS6 310 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 CAPZA3Q96KX2 299 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 RUFY1Q96T51 708 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 NLNQ9BYT8 704 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 FAM60AQ9NP50 221 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 IL1RAPL1Q9NZN1 696 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 G3BP2Q9UN86 482 aaKnown RBP18.52■□□□□ 0.56
CTSA-217ENST00000607482 CFAP46Q8IYW2 2715 aa18.52■□□□□ 0.56
CTSA-217ENST00000607482 BOD1L1Q8NFC6 3051 aa18.52■□□□□ 0.55
CTSA-217ENST00000607482 ZSCAN9O15535 394 aaPredicted RBP18.51■□□□□ 0.55
CTSA-217ENST00000607482 FURINP09958 794 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 RAB40ALP0C0E4 278 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 TPBGLP0DKB5 382 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 MAGP20916 626 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 BDKRB1P46663 353 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 TSTA3Q13630 321 aaPredicted RBP18.51■□□□□ 0.55
CTSA-217ENST00000607482 ZC3H12BQ5HYM0 836 aaKnown RBP18.51■□□□□ 0.55
CTSA-217ENST00000607482 C1orf189Q5VU69 101 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 MLIPQ5VWP3 458 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 TLDC1Q6P9B6 456 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 FAM20CQ8IXL6 584 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 ZNF655Q8N720 491 aaPredicted RBP18.51■□□□□ 0.55
CTSA-217ENST00000607482 DENND1AQ8TEH3 1009 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 BIRC8Q96P09 236 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 SPRTNQ9H040 489 aaPredicted RBP18.51■□□□□ 0.55
CTSA-217ENST00000607482 DDX47Q9H0S4 455 aaKnown RBP18.51■□□□□ 0.55
CTSA-217ENST00000607482 KCNF1Q9H3M0 494 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 ACSS2Q9NR19 701 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 FAM114A2Q9NRY5 505 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 PCMTD2Q9NV79 361 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 NDOR1Q9UHB4 597 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 SRPK3Q9UPE1 567 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 RUVBL2Q9Y230 463 aaKnown RBP18.51■□□□□ 0.55
CTSA-217ENST00000607482 KLHL20Q9Y2M5 609 aa18.51■□□□□ 0.55
CTSA-217ENST00000607482 USP1O94782 785 aa18.5■□□□□ 0.55
CTSA-217ENST00000607482 C1orf105O95561 183 aa18.5■□□□□ 0.55
CTSA-217ENST00000607482 ALAS2P22557 587 aa18.5■□□□□ 0.55
CTSA-217ENST00000607482 PMS2P54278 862 aa18.5■□□□□ 0.55
CTSA-217ENST00000607482 ADARP55265 1226 aaKnown RBP18.5■□□□□ 0.55
CTSA-217ENST00000607482 CTBP1Q13363 440 aa18.5■□□□□ 0.55
CTSA-217ENST00000607482 ZIC1Q15915 447 aa18.5■□□□□ 0.55
CTSA-217ENST00000607482 MCATQ8IVS2 390 aaKnown RBP18.5■□□□□ 0.55
CTSA-217ENST00000607482 LMNTD2Q8IXW0 634 aa18.5■□□□□ 0.55
CTSA-217ENST00000607482 DLG3Q92796 817 aa18.5■□□□□ 0.55
CTSA-217ENST00000607482 TRIM56Q9BRZ2 755 aaKnown RBP18.5■□□□□ 0.55
CTSA-217ENST00000607482 CHRNA10Q9GZZ6 450 aa18.5■□□□□ 0.55
CTSA-217ENST00000607482 FBXO6Q9NRD1 293 aaPredicted RBP18.5■□□□□ 0.55
CTSA-217ENST00000607482 IFT80Q9P2H3 777 aaPredicted RBP18.5■□□□□ 0.55
CTSA-217ENST00000607482 TCFL5Q9UL49 500 aa18.5■□□□□ 0.55
CTSA-217ENST00000607482 NFS1Q9Y697 457 aa18.5■□□□□ 0.55
CTSA-217ENST00000607482 ARGFXA6NJG6 315 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 CATP04040 527 aaKnown RBP18.49■□□□□ 0.55
CTSA-217ENST00000607482 CD63P08962 238 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 ATP5DP30049 168 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 RORAP35398 523 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 PAFAH1B1P43034 410 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 DCDP81605 110 aaKnown RBP18.49■□□□□ 0.55
CTSA-217ENST00000607482 NCF4Q15080 339 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 ZNF789Q5FWF6 425 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 CENPUQ71F23 418 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 KLHL7Q8IXQ5 586 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 NAT8LQ8N9F0 302 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 LMNTD1Q8N9Z9 388 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 LINC01555Q8NAE3 123 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.49■□□□□ 0.55
CTSA-217ENST00000607482 PROKR1Q8TCW9 393 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 RUNDC3BQ96NL0 473 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 FAM167BQ9BTA0 163 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 TRIM4Q9C037 500 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 PPANQ9NQ55 473 aaKnown RBP18.49■□□□□ 0.55
CTSA-217ENST00000607482 EURLQ9NYK6 297 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 SPTA1P02549 2419 aa18.49■□□□□ 0.55
CTSA-217ENST00000607482 ZNF839A8K0R7 811 aa18.48■□□□□ 0.55
CTSA-217ENST00000607482 PYCARD-AS1I3L0S3 204 aa18.48■□□□□ 0.55
CTSA-217ENST00000607482 SUV39H1O43463 412 aa18.48■□□□□ 0.55
CTSA-217ENST00000607482 FKBP9O95302 570 aa18.48■□□□□ 0.55
CTSA-217ENST00000607482 SYF2O95926 243 aaKnown RBP18.48■□□□□ 0.55
CTSA-217ENST00000607482 PGAM1P18669 254 aa18.48■□□□□ 0.55
CTSA-217ENST00000607482 PEBP1P30086 187 aaKnown RBP18.48■□□□□ 0.55
CTSA-217ENST00000607482 RPA3P35244 121 aaPredicted RBP18.48■□□□□ 0.55
CTSA-217ENST00000607482 GRIA3P42263 894 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms