RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 DCDC2Q9UHG0 476 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 TBC1D24Q9ULP9 559 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 SSR3Q9UNL2 185 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 PCDHA10Q9Y5I2 948 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 PAPPAQ13219 1627 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 SLC15A5A6NIM6 579 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 ZNF99A8MXY4 864 aaPredicted RBP8.69□□□□□ -1.02
COMMD3-215ENST00000602574 EFSO43281 561 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 PRKYO43930 277 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 LPXNO60711 386 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 F9P00740 461 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 CCNYL3P0C7X3 344 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 JUNDP17535 347 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 RPL10P27635 214 aaKnown RBP8.69□□□□□ -1.02
COMMD3-215ENST00000602574 PCGF2P35227 344 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 CRKLP46109 303 aaKnown RBP8.69□□□□□ -1.02
COMMD3-215ENST00000602574 NUMBP49757 651 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 CDH13P55290 713 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 STARD6P59095 220 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 SOX4Q06945 474 aaPredicted RBP8.69□□□□□ -1.02
COMMD3-215ENST00000602574 HNF4GQ14541 408 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 NFIXQ14938 502 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 POU4F3Q15319 338 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 COLEC12Q5KU26 742 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 ANKS6Q68DC2 871 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 FAM111BQ6SJ93 734 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 SLC13A5Q86YT5 568 aaPredicted RBP8.69□□□□□ -1.02
COMMD3-215ENST00000602574 ADGRF4Q8IZF3 695 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 ZSCAN1Q8NBB4 408 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 CPXM1Q96SM3 734 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 KLHL31Q9H511 634 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 SLC52A2Q9HAB3 445 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 ELOVL2Q9NXB9 296 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 TMEM181Q9P2C4 612 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 MAP10Q9P2G4 905 aa8.69□□□□□ -1.02
COMMD3-215ENST00000602574 HMX2A2RU54 273 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 SOCS2O14508 198 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 PMPCBO75439 489 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 PIAS1O75925 651 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 UBXN7O94888 489 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 VAPBO95292 243 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 FGF2P09038 288 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 SDHAP31040 664 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 HUNKP57058 714 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 ADARB1P78563 741 aaKnown RBP8.68□□□□□ -1.02
COMMD3-215ENST00000602574 GAGE1Q13065 139 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 DSG2Q14126 1118 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 LRRC41Q15345 812 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 DUOXA2Q1HG44 320 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 TTC38Q5R3I4 469 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 AFMIDQ63HM1 303 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 NRARPQ7Z6K4 114 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 ADGRD2Q7Z7M1 963 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 SIAH1Q8IUQ4 282 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 MCOLN2Q8IZK6 566 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 PPM1NQ8N819 430 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 GLYATL2Q8WU03 294 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 LRTOMTQ8WZ04 291 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 ARMC5Q96C12 935 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 MYRFLQ96LU7 910 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 WDR77Q9BQA1 342 aaPredicted RBP8.68□□□□□ -1.02
COMMD3-215ENST00000602574 EBF4Q9BQW3 602 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 AP5M1Q9H0R1 490 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 GANQ9H2C0 597 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 CLEC4MQ9H2X3 399 aaPredicted RBP8.68□□□□□ -1.02
COMMD3-215ENST00000602574 RASSF1Q9NS23 344 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 NOCTQ9UK39 431 aaKnown RBP8.68□□□□□ -1.02
COMMD3-215ENST00000602574 NPFFR2Q9Y5X5 522 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 ALG5Q9Y673 324 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 ATP6AP2A0A1C7CYW4 349 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 A0A1W2PPL8 197 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 CLDN24A6NM45 220 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 WASH4PA8MWX3 477 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 PPP6CO00743 305 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 CYP7B1O75881 506 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 OTCP00480 354 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 CRHBPP24387 322 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 ATP5F1P24539 256 aaPredicted RBP8.68□□□□□ -1.02
COMMD3-215ENST00000602574 ACADLP28330 430 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 RFX2P48378 723 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 GP2P55259 537 aaKnown RBP8.68□□□□□ -1.02
COMMD3-215ENST00000602574 NUTF2P61970 127 aaKnown RBP8.68□□□□□ -1.02
COMMD3-215ENST00000602574 LIPEQ05469 1076 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 BST1Q10588 318 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 XKR4Q5GH76 650 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 TPRG1LQ5T0D9 272 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 STXBP5Q5T5C0 1151 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 VASNQ6EMK4 673 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 RAB12Q6IQ22 244 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 DPY19L2P1Q6NXN4 242 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 STRADAQ7RTN6 431 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 IRF2BP2Q7Z5L9 587 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 RAB44Q7Z6P3 723 aaPredicted RBP8.68□□□□□ -1.02
COMMD3-215ENST00000602574 P2RY8Q86VZ1 359 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 NRSN1Q8IZ57 195 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 ZNF654Q8IZM8 581 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 GHDCQ8N2G8 530 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 EFHBQ8N7U6 833 aa8.68□□□□□ -1.02
COMMD3-215ENST00000602574 ZNF557Q8N988 423 aaPredicted RBP8.68□□□□□ -1.02
COMMD3-215ENST00000602574 ALG3Q92685 438 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms