RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 CKAP2Q8WWK9 683 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 TBC1D10AQ9BXI6 508 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 TRIM54Q9BYV2 358 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 GSTO2Q9H4Y5 243 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 ZBTB26Q9HCK0 441 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 SEMA4GQ9NTN9 838 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 POT1Q9NUX5 634 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 INTS7Q9NVH2 962 aaKnown RBP22.24■■□□□ 1.15
IRF3-227ENST00000600911 SH2B3Q9UQQ2 575 aa22.24■■□□□ 1.15
IRF3-227ENST00000600911 RP1P56715 2156 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 A0A1W2PPV9 198 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 E7ENX8 843 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 STX16-NPEPL1H3BU86 382 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 E2F3O00716 465 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 STX16O14662 325 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 TRIM13O60858 407 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 LYPLA1O75608 230 aaPredicted RBP22.23■■□□□ 1.15
IRF3-227ENST00000600911 LMNAP02545 664 aaKnown RBP22.23■■□□□ 1.15
IRF3-227ENST00000600911 PEBP1P30086 187 aaKnown RBP22.23■■□□□ 1.15
IRF3-227ENST00000600911 PKLRP30613 574 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 MDH1P40925 334 aaKnown RBP22.23■■□□□ 1.15
IRF3-227ENST00000600911 CDH13P55290 713 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 DNAJB13P59910 316 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 TAP2Q03519 686 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 NAE1Q13564 534 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 C14orf28Q4W4Y0 310 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 TRIM48Q8IWZ4 208 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 UBTD2Q8WUN7 234 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 L3HYPDHQ96EM0 354 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 OR4K3Q96R72 315 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 ABCF3Q9NUQ8 709 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 NLGN3Q9NZ94 848 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 MID2Q9UJV3 735 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 PCTPQ9UKL6 214 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 HEBP2Q9Y5Z4 205 aa22.23■■□□□ 1.15
IRF3-227ENST00000600911 OR5K4A6NMS3 321 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 SIGLEC6O43699 453 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 EPORP19235 508 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 IMPDH1P20839 514 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 PSMB5P28074 263 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 GGT5P36269 586 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 PNLIPRP1P54315 467 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 TBPL1P62380 186 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 HERVK_113P63132 956 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 PDK4Q16654 411 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 LSMEM2Q8N112 164 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 EID2Q8N6I1 236 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 CCNYL1Q8N7R7 359 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 OR4C6Q8NH72 309 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 ZNF75CPQ92670 426 aaPredicted RBP22.22■■□□□ 1.15
IRF3-227ENST00000600911 PRR11Q96HE9 360 aaPredicted RBP22.22■■□□□ 1.15
IRF3-227ENST00000600911 ERVK-6Q9BXR3 956 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 TNFRSF12AQ9NP84 129 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 OGFRQ9NZT2 677 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 RNF215Q9Y6U7 377 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 COLEC10Q9Y6Z7 277 aa22.22■■□□□ 1.15
IRF3-227ENST00000600911 DFNA5O60443 496 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 CCNT2O60583 730 aaKnown RBP22.21■■□□□ 1.15
IRF3-227ENST00000600911 PRAMEF4O60810 478 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 S100BP04271 92 aaPredicted RBP22.21■■□□□ 1.15
IRF3-227ENST00000600911 RPN2P04844 631 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 CHRNGP07510 517 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 FASLGP48023 281 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 BST1Q10588 318 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 PCBP2Q15366 365 aaKnown RBP eCLIP22.21■■□□□ 1.154e-7■■■■■ 30.4
IRF3-227ENST00000600911 CYP2A13Q16696 494 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 PRAMEF9Q5VWM5 478 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 TMEM26Q6ZUK4 368 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 SLC9B2Q86UD5 537 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 SLC22A9Q8IVM8 553 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 OR4E2Q8NGC2 313 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 OR56A3Q8NH54 315 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 MAGEC3Q8TD91 643 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 C1QTNF3Q9BXJ4 246 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 CD244Q9BZW8 370 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 SPHK1Q9NYA1 384 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 POLG2Q9UHN1 485 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 SLC22A14Q9Y267 594 aa22.21■■□□□ 1.15
IRF3-227ENST00000600911 BTN3A3O00478 584 aa22.2■■□□□ 1.15
IRF3-227ENST00000600911 PCDHGA12O60330 932 aa22.2■■□□□ 1.15
IRF3-227ENST00000600911 CDKL4Q5MAI5 379 aa22.2■■□□□ 1.15
IRF3-227ENST00000600911 TTC23LQ6PF05 361 aa22.2■■□□□ 1.15
IRF3-227ENST00000600911 SYTL1Q8IYJ3 562 aa22.2■■□□□ 1.15
IRF3-227ENST00000600911 ARL10Q8N8L6 244 aa22.2■■□□□ 1.15
IRF3-227ENST00000600911 ZNF483Q8TF39 744 aaPredicted RBP22.2■■□□□ 1.15
IRF3-227ENST00000600911 DYDC1Q8WWB3 177 aa22.2■■□□□ 1.15
IRF3-227ENST00000600911 MED8Q96G25 268 aa22.2■■□□□ 1.15
IRF3-227ENST00000600911 APOLD1Q96LR9 279 aa22.2■■□□□ 1.15
IRF3-227ENST00000600911 SHCBP1LQ9BZQ2 653 aa22.2■■□□□ 1.15
IRF3-227ENST00000600911 DNAAF2Q9NVR5 837 aaKnown RBP22.2■■□□□ 1.15
IRF3-227ENST00000600911 NCDNQ9UBB6 729 aa22.2■■□□□ 1.15
IRF3-227ENST00000600911 UBFD1O14562 309 aaKnown RBP22.2■■□□□ 1.14
IRF3-227ENST00000600911 YKT6O15498 198 aa22.2■■□□□ 1.14
IRF3-227ENST00000600911 SUPT7LO94864 414 aa22.2■■□□□ 1.14
IRF3-227ENST00000600911 SLC2A4P14672 509 aa22.2■■□□□ 1.14
IRF3-227ENST00000600911 PRDX3P30048 256 aaKnown RBP22.2■■□□□ 1.14
IRF3-227ENST00000600911 RAB28P51157 221 aa22.2■■□□□ 1.14
IRF3-227ENST00000600911 TSTA3Q13630 321 aaPredicted RBP22.2■■□□□ 1.14
IRF3-227ENST00000600911 GOLGA7Q7Z5G4 137 aa22.2■■□□□ 1.14
IRF3-227ENST00000600911 FAM20CQ8IXL6 584 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms