RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 SF1Q15637 639 aaKnown RBP13.82□□□□□ -0.2
IRF3-224ENST00000599680 LONRF1Q17RB8 773 aa13.82□□□□□ -0.2
IRF3-224ENST00000599680 CILP2Q8IUL8 1156 aa13.82□□□□□ -0.2
IRF3-224ENST00000599680 SYTL1Q8IYJ3 562 aa13.82□□□□□ -0.2
IRF3-224ENST00000599680 ZBTB2Q8N680 514 aa13.82□□□□□ -0.2
IRF3-224ENST00000599680 SLC38A9Q8NBW4 561 aa13.82□□□□□ -0.2
IRF3-224ENST00000599680 GABPB2Q8TAK5 448 aaPredicted RBP13.82□□□□□ -0.2
IRF3-224ENST00000599680 CALML6Q8TD86 181 aa13.82□□□□□ -0.2
IRF3-224ENST00000599680 FAM136AQ96C01 138 aa13.82□□□□□ -0.2
IRF3-224ENST00000599680 BIRC8Q96P09 236 aa13.82□□□□□ -0.2
IRF3-224ENST00000599680 IL17FQ96PD4 163 aa13.82□□□□□ -0.2
IRF3-224ENST00000599680 RUFY1Q96T51 708 aa13.82□□□□□ -0.2
IRF3-224ENST00000599680 DPH2Q9BQC3 489 aaPredicted RBP13.82□□□□□ -0.2
IRF3-224ENST00000599680 DDX47Q9H0S4 455 aaKnown RBP13.82□□□□□ -0.2
IRF3-224ENST00000599680 FAM60AQ9NP50 221 aa13.82□□□□□ -0.2
IRF3-224ENST00000599680 C20orf96Q9NUD7 363 aaPredicted RBP13.82□□□□□ -0.2
IRF3-224ENST00000599680 TXLNGQ9NUQ3 528 aa13.82□□□□□ -0.2
IRF3-224ENST00000599680 IL1RAPL1Q9NZN1 696 aa13.82□□□□□ -0.2
IRF3-224ENST00000599680 GPN3Q9UHW5 284 aaPredicted RBP13.82□□□□□ -0.2
IRF3-224ENST00000599680 SNX7Q9UNH6 387 aa13.82□□□□□ -0.2
IRF3-224ENST00000599680 KCNMB2Q9Y691 235 aa13.82□□□□□ -0.2
IRF3-224ENST00000599680 NFS1Q9Y697 457 aa13.82□□□□□ -0.2
IRF3-224ENST00000599680 AP1M2Q9Y6Q5 423 aa13.82□□□□□ -0.2
IRF3-224ENST00000599680 HEATR5BQ9P2D3 2071 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 RFPL1O75677 317 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 USP1O94782 785 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 C1orf105O95561 183 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 FURINP09958 794 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 RAB40ALP0C0E4 278 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 MAGP20916 626 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 ATP5DP30049 168 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 PEBP1P30086 187 aaKnown RBP13.81□□□□□ -0.2
IRF3-224ENST00000599680 ADARP55265 1226 aaKnown RBP13.81□□□□□ -0.2
IRF3-224ENST00000599680 GNG11P61952 73 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 NFKB2Q00653 900 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 UGT8Q16880 541 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 PTCHD3Q3KNS1 767 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 TTLL9Q3SXZ7 439 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 IZUMO3Q5VZ72 239 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 ATG14Q6ZNE5 492 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 PCGF5Q86SE9 256 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 PTRH1Q86Y79 214 aaKnown RBP13.81□□□□□ -0.2
IRF3-224ENST00000599680 LMNTD2Q8IXW0 634 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 ENDOVQ8N8Q3 282 aaKnown RBP13.81□□□□□ -0.2
IRF3-224ENST00000599680 NAT8LQ8N9F0 302 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 LINC01555Q8NAE3 123 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 FLVCR1-AS1Q8TAF5 88 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 CAPZA3Q96KX2 299 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 C17orf62Q9BQA9 187 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 TRIM56Q9BRZ2 755 aaKnown RBP13.81□□□□□ -0.2
IRF3-224ENST00000599680 NDC1Q9BTX1 674 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 NLNQ9BYT8 704 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 CHRNA10Q9GZZ6 450 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 ZNF71Q9NQZ8 489 aaPredicted RBP13.81□□□□□ -0.2
IRF3-224ENST00000599680 FBXO6Q9NRD1 293 aaPredicted RBP13.81□□□□□ -0.2
IRF3-224ENST00000599680 PCMTD2Q9NV79 361 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 SRPK3Q9UPE1 567 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 PLCL2Q9UPR0 1127 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 RUVBL2Q9Y230 463 aaKnown RBP13.81□□□□□ -0.2
IRF3-224ENST00000599680 NEU2Q9Y3R4 380 aa13.81□□□□□ -0.2
IRF3-224ENST00000599680 MDC1Q14676 2089 aaKnown RBP13.81□□□□□ -0.2
IRF3-224ENST00000599680 USP27XA6NNY8 438 aa13.8□□□□□ -0.2
IRF3-224ENST00000599680 ZSCAN9O15535 394 aaPredicted RBP13.8□□□□□ -0.2
IRF3-224ENST00000599680 ATXN8OSP0DMR3 200 aa13.8□□□□□ -0.2
IRF3-224ENST00000599680 RORAP35398 523 aa13.8□□□□□ -0.2
IRF3-224ENST00000599680 CTBP1Q13363 440 aa13.8□□□□□ -0.2
IRF3-224ENST00000599680 PTK6Q13882 451 aa13.8□□□□□ -0.2
IRF3-224ENST00000599680 ZIC1Q15915 447 aa13.8□□□□□ -0.2
IRF3-224ENST00000599680 LACTB2Q53H82 288 aaPredicted RBP13.8□□□□□ -0.2
IRF3-224ENST00000599680 ZNF789Q5FWF6 425 aa13.8□□□□□ -0.2
IRF3-224ENST00000599680 TLDC1Q6P9B6 456 aa13.8□□□□□ -0.2
IRF3-224ENST00000599680 CENPUQ71F23 418 aa13.8□□□□□ -0.2
IRF3-224ENST00000599680 TMEM135Q86UB9 458 aa13.8□□□□□ -0.2
IRF3-224ENST00000599680 FAM20CQ8IXL6 584 aa13.8□□□□□ -0.2
IRF3-224ENST00000599680 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.8□□□□□ -0.2
IRF3-224ENST00000599680 THAP4Q8WY91 577 aa13.8□□□□□ -0.2
IRF3-224ENST00000599680 ABHD17AQ96GS6 310 aa13.8□□□□□ -0.2
IRF3-224ENST00000599680 FAM167BQ9BTA0 163 aa13.8□□□□□ -0.2
IRF3-224ENST00000599680 SPRTNQ9H040 489 aaPredicted RBP13.8□□□□□ -0.2
IRF3-224ENST00000599680 FAM114A2Q9NRY5 505 aa13.8□□□□□ -0.2
IRF3-224ENST00000599680 PADI2Q9Y2J8 665 aa13.8□□□□□ -0.2
IRF3-224ENST00000599680 KLHL20Q9Y2M5 609 aa13.8□□□□□ -0.2
IRF3-224ENST00000599680 ZCWPW2A0A1B0GU75 182 aa13.79□□□□□ -0.2
IRF3-224ENST00000599680 DNALI1O14645 258 aaPredicted RBP13.79□□□□□ -0.2
IRF3-224ENST00000599680 FKBP9O95302 570 aa13.79□□□□□ -0.2
IRF3-224ENST00000599680 CATP04040 527 aaKnown RBP13.79□□□□□ -0.2
IRF3-224ENST00000599680 PGAM1P18669 254 aa13.79□□□□□ -0.2
IRF3-224ENST00000599680 SLC1A2P43004 574 aa13.79□□□□□ -0.2
IRF3-224ENST00000599680 MAGEA3P43357 314 aa13.79□□□□□ -0.2
IRF3-224ENST00000599680 PMS2P54278 862 aa13.79□□□□□ -0.2
IRF3-224ENST00000599680 IL10RAQ13651 578 aa13.79□□□□□ -0.2
IRF3-224ENST00000599680 GRB7Q14451 532 aa13.79□□□□□ -0.2
IRF3-224ENST00000599680 KLHL38Q2WGJ6 581 aa13.79□□□□□ -0.2
IRF3-224ENST00000599680 ZC3H12BQ5HYM0 836 aaKnown RBP13.79□□□□□ -0.2
IRF3-224ENST00000599680 RNASEH2BQ5TBB1 312 aaKnown RBP13.79□□□□□ -0.2
IRF3-224ENST00000599680 C1orf189Q5VU69 101 aa13.79□□□□□ -0.2
IRF3-224ENST00000599680 FIGLAQ6QHK4 219 aa13.79□□□□□ -0.2
IRF3-224ENST00000599680 ZNF517Q6ZMY9 492 aaPredicted RBP13.79□□□□□ -0.2
IRF3-224ENST00000599680 DENND6AQ8IWF6 608 aa13.79□□□□□ -0.2
IRF3-224ENST00000599680 DNAJC22Q8N4W6 341 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms