RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 SERPING1P05155 500 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 SERPINA7P05543 415 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 FAM228BP0C875 321 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 PRR35P0CG20 571 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 MYBL2P10244 700 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 KIR3DL1P43629 444 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 NR2C2P49116 596 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 XIAPP98170 497 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 GRM7Q14831 915 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 NFKBIBQ15653 356 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 ODF2Q5BJF6 829 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 FIGNQ5HY92 759 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 TCTE1Q5JU00 501 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 FAAH2Q6GMR7 532 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 SNX20Q7Z614 316 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 MCATQ8IVS2 390 aaKnown RBP9.7□□□□□ -0.86
TRIM28-210ENST00000597618 FAM20CQ8IXL6 584 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 TBC1D21Q8IYX1 336 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 TTC29Q8NA56 475 aaPredicted RBP9.7□□□□□ -0.86
TRIM28-210ENST00000597618 SUN3Q8TAQ9 357 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 BRIX1Q8TDN6 353 aaKnown RBP9.7□□□□□ -0.86
TRIM28-210ENST00000597618 MAGED4Q96JG8 741 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 VAT1Q99536 393 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 RNF32Q9H0A6 362 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 TINAGQ9UJW2 476 aa9.7□□□□□ -0.86
TRIM28-210ENST00000597618 IGLV3-16A0A075B6K0 115 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 NSG1A0A0A6YYJ2 146 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 LIN7AO14910 233 aaPredicted RBP9.69□□□□□ -0.86
TRIM28-210ENST00000597618 BMP10O95393 424 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 NADKO95544 446 aaPredicted RBP9.69□□□□□ -0.86
TRIM28-210ENST00000597618 CRTAMO95727 393 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 KRT1P04264 644 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 H2AFZP0C0S5 128 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 COX6A1P12074 109 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 MAGP20916 626 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 NSG1P42857 185 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 OR1D4P47884 311 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 RAB28P51157 221 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 OCA2Q04671 838 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 KLC1Q07866 573 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 C3AR1Q16581 482 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 GPR33Q49SQ1 333 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 ZC3H12BQ5HYM0 836 aaKnown RBP9.69□□□□□ -0.86
TRIM28-210ENST00000597618 CNSTQ6PJW8 725 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 H2AFVQ71UI9 128 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 NDUFAF7Q7L592 441 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 ZNF567Q8N184 647 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 SIRT6Q8N6T7 355 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 OR5K2Q8NHB8 316 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.69□□□□□ -0.86
TRIM28-210ENST00000597618 CTNNBL1Q8WYA6 563 aaPredicted RBP9.69□□□□□ -0.86
TRIM28-210ENST00000597618 PSMF1Q92530 271 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 C19orf43Q9BQ61 176 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 MESP1Q9BRJ9 268 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 GPAMQ9HCL2 828 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 LUC7LQ9NQ29 371 aaKnown RBP9.69□□□□□ -0.86
TRIM28-210ENST00000597618 ENAMQ9NRM1 1142 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 INTS7Q9NVH2 962 aaKnown RBP9.69□□□□□ -0.86
TRIM28-210ENST00000597618 ZDHHC3Q9NYG2 299 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 RSPH14Q9UHP6 348 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 C3orf18Q9UK00 162 aa9.69□□□□□ -0.86
TRIM28-210ENST00000597618 TDRKHQ9Y2W6 561 aaKnown RBP9.69□□□□□ -0.86
TRIM28-210ENST00000597618 CACNA1CQ13936 2221 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 A0A1W2PQ72 361 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 FITM1A5D6W6 292 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 PRAMEF2O60811 474 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 WFS1O76024 890 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 AP2A2O94973 939 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 AP2A1O95782 977 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 MLYCDO95822 493 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 WDPCPO95876 746 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 F10P00742 488 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 AGTP01019 485 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 HOXB4P17483 251 aaPredicted RBP9.68□□□□□ -0.86
TRIM28-210ENST00000597618 ACRV1P26436 265 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 ACADLP28330 430 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 PEBP1P30086 187 aaKnown RBP9.68□□□□□ -0.86
TRIM28-210ENST00000597618 ZNF140P52738 457 aaPredicted RBP9.68□□□□□ -0.86
TRIM28-210ENST00000597618 ART1P52961 327 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 AP2B1P63010 937 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 CACNG1Q06432 222 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 TFDP2Q14188 446 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 CDSNQ15517 529 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 LONRF1Q17RB8 773 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 FAM214AQ32MH5 1076 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 ATG9BQ674R7 924 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 HIBCHQ6NVY1 386 aaPredicted RBP9.68□□□□□ -0.86
TRIM28-210ENST00000597618 RIPOR1Q6ZS17 1223 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 PID1Q7Z2X4 250 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 METTL27Q8N6F8 245 aaPredicted RBP9.68□□□□□ -0.86
TRIM28-210ENST00000597618 ACBD4Q8NC06 268 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 OR13C4Q8NGS5 318 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 STT3BQ8TCJ2 826 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 THAP3Q8WTV1 239 aaPredicted RBP9.68□□□□□ -0.86
TRIM28-210ENST00000597618 SLC22A18Q96BI1 424 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 MIEF2Q96C03 454 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 C8orf44Q96CB5 159 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 SELENOSQ9BQE4 189 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 FICDQ9BVA6 458 aa9.68□□□□□ -0.86
TRIM28-210ENST00000597618 ENKD1Q9H0I2 346 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms