RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ADAM21Q9UKJ8 722 aa18.7■□□□□ 0.58
PNKP-207ENST00000596014 IKZF3Q9UKT9 509 aa18.7■□□□□ 0.58
PNKP-207ENST00000596014 PDE10AQ9Y233 779 aa18.7■□□□□ 0.58
PNKP-207ENST00000596014 MSRB2Q9Y3D2 182 aa18.7■□□□□ 0.58
PNKP-207ENST00000596014 PIPSLA2A3N6 862 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 MATN2O00339 956 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 ALDOAP04075 364 aaKnown RBP18.69■□□□□ 0.58
PNKP-207ENST00000596014 SHBGP04278 402 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 CYP2A7P20853 494 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 PRDX3P30048 256 aaKnown RBP18.69■□□□□ 0.58
PNKP-207ENST00000596014 CSRP3P50461 194 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 SHC2P98077 582 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 CAMK2BQ13554 666 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 C16orf72Q14CZ0 275 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 ARHGAP22Q7Z5H3 698 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 SPATA6LQ8N4H0 392 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 RAB42Q8N4Z0 105 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 C2orf73Q8N5S3 287 aaPredicted RBP18.69■□□□□ 0.58
PNKP-207ENST00000596014 DERL2Q9GZP9 239 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 SNX15Q9NRS6 342 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 SPHK1Q9NYA1 384 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 SPATA7Q9P0W8 599 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 POMT2Q9UKY4 750 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 C2orf74A8MZ97 194 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 CDC7O00311 574 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 TOX3O15405 576 aaPredicted RBP18.69■□□□□ 0.58
PNKP-207ENST00000596014 RASSF9O75901 435 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 KRT37O76014 449 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 C2P06681 752 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 TYK2P29597 1187 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 GMPRP36959 345 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 SERPINB8P50452 374 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 KPNA2P52292 529 aaKnown RBP18.69■□□□□ 0.58
PNKP-207ENST00000596014 CYP2A13Q16696 494 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 PHKG1Q16816 387 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 LGSNQ5TDP6 509 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 ANKS6Q68DC2 871 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 SBSNQ6UWP8 590 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 ARL8AQ96BM9 186 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 CD180Q99467 661 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 PSD3Q9NYI0 1048 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 ACTR10Q9NZ32 417 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 ACOT9Q9Y305 439 aa18.69■□□□□ 0.58
PNKP-207ENST00000596014 AGRPO00253 132 aa18.68■□□□□ 0.58
PNKP-207ENST00000596014 HGSO14964 777 aaPredicted RBP18.68■□□□□ 0.58
PNKP-207ENST00000596014 SLC16A8O95907 504 aa18.68■□□□□ 0.58
PNKP-207ENST00000596014 SNRPAP09012 282 aaKnown RBP18.68■□□□□ 0.58
PNKP-207ENST00000596014 ANKRD34CP0C6C1 535 aa18.68■□□□□ 0.58
PNKP-207ENST00000596014 ERGP11308 486 aa18.68■□□□□ 0.58
PNKP-207ENST00000596014 HSD17B2P37059 387 aa18.68■□□□□ 0.58
PNKP-207ENST00000596014 DMTNQ08495 405 aa18.68■□□□□ 0.58
PNKP-207ENST00000596014 CSHL1Q14406 222 aa18.68■□□□□ 0.58
PNKP-207ENST00000596014 ARHGAP19Q14CB8 494 aa18.68■□□□□ 0.58
PNKP-207ENST00000596014 CACHD1Q5VU97 1274 aa18.68■□□□□ 0.58
PNKP-207ENST00000596014 FAM76AQ8TAV0 307 aa18.68■□□□□ 0.58
PNKP-207ENST00000596014 HMGCLL1Q8TB92 370 aa18.68■□□□□ 0.58
PNKP-207ENST00000596014 PPM1MQ96MI6 270 aa18.68■□□□□ 0.58
PNKP-207ENST00000596014 MAP3K3Q99759 626 aa18.68■□□□□ 0.58
PNKP-207ENST00000596014 UNKQ9C0B0 810 aaKnown RBP18.68■□□□□ 0.58
PNKP-207ENST00000596014 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.68■□□□□ 0.58
PNKP-207ENST00000596014 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.68■□□□□ 0.58
PNKP-207ENST00000596014 SEMA5BQ9P283 1151 aa18.68■□□□□ 0.58
PNKP-207ENST00000596014 TLK1Q9UKI8 766 aa18.68■□□□□ 0.58
PNKP-207ENST00000596014 ANGPTL2Q9UKU9 493 aa18.68■□□□□ 0.58
PNKP-207ENST00000596014 CCDC187A0A096LP49 1063 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 A0A1W2PNU3 283 aaPredicted RBP18.67■□□□□ 0.58
PNKP-207ENST00000596014 TLCD2A6NGC4 264 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 TRIM49D1C9J1S8 452 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 HIST1H2AGP0C0S8 130 aaPredicted RBP18.67■□□□□ 0.58
PNKP-207ENST00000596014 CD1DP15813 335 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 HIST1H2ADP20671 130 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 PEBP1P30086 187 aaKnown RBP18.67■□□□□ 0.58
PNKP-207ENST00000596014 SLC26A3P40879 764 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 ZNF844Q08AG5 666 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 KIR2DS3Q14952 304 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 CEP85LQ5SZL2 805 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 RAB11FIP2Q7L804 512 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 PRSS42Q7Z5A4 293 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 CCDC91Q7Z6B0 441 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 TBC1D1Q86TI0 1168 aaPredicted RBP18.67■□□□□ 0.58
PNKP-207ENST00000596014 FLVCR1-AS1Q8TAF5 88 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 ZNF480Q8WV37 535 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 ISL2Q96A47 359 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 HIST1H2AHQ96KK5 128 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 CCDC138Q96M89 665 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 OR2A14Q96R47 310 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 CMKLR1Q99788 373 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 HIST1H2AJQ99878 128 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 H2AFJQ9BTM1 129 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 TRIM54Q9BYV2 358 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 CTNNAL1Q9UBT7 734 aa18.67■□□□□ 0.58
PNKP-207ENST00000596014 NOVA2Q9UNW9 492 aaKnown RBP18.67■□□□□ 0.58
PNKP-207ENST00000596014 A0A096LPK6 155 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 IGHV5-51A0A0C4DH38 117 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 NPEPPSL1A6NEC2 478 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 ISM1B1AKI9 464 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 ENO2P09104 434 aaPredicted RBP18.66■□□□□ 0.58
PNKP-207ENST00000596014 UGT2B7P16662 529 aa18.66■□□□□ 0.58
PNKP-207ENST00000596014 CSTF2P33240 577 aaKnown RBP eCLIP18.66■□□□□ 0.58
PNKP-207ENST00000596014 MAGEA12P43365 314 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms