RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 FFAR2O15552 330 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 OR4F21O95013 312 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 RASAL1O95294 804 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 RGS4P49798 205 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 POM121L1PQ3SYA9 428 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 LYPLAL1Q5VWZ2 237 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 GDPD4Q6W3E5 623 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 EPHX4Q8IUS5 362 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 PHYKPLQ8IUZ5 450 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 PEX5LQ8IYB4 626 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 ZBTB2Q8N680 514 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 ITFG1Q8TB96 612 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 MCCC1Q96RQ3 725 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 HTATIP2Q9BUP3 242 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 LATS2Q9NRM7 1088 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 MRPS23Q9Y3D9 190 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 MTCL1Q9Y4B5 1905 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 CHEK2O96017 543 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 S100BP04271 92 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 GPX3P22352 226 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 DGKAP23743 735 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 TPTEP56180 551 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 IFITM2Q01629 132 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 E2F2Q14209 437 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 GTF2IRD2BQ6EKJ0 949 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 HACD2Q6Y1H2 254 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 PLEKHG7Q6ZR37 379 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 GPRIN3Q6ZVF9 776 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 DET1Q7L5Y6 550 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 GTF2IRD2Q86UP8 949 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 FUNDC1Q8IVP5 155 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 IQCF2Q8IXL9 164 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 DHRSXQ8N5I4 330 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 C12orf76Q8N812 135 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 ZNF366Q8N895 744 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 PHOSPHO2Q8TCD6 241 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 SNX19Q92543 992 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 LRRC3BQ96PB8 259 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 SLC25A23Q9BV35 468 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 AGPAT4Q9NRZ5 378 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 TMEM181Q9P2C4 612 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 ERVW-1Q9UQF0 538 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 NOTCH4Q99466 2003 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 SZT2Q5T011 3432 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 AQP12BA6NM10 295 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 AREL1O15033 823 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 NTRK1P04629 796 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 C1SP09871 688 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 UROSP10746 265 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 LBPP18428 481 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 HOXA9P31269 272 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 DIO3P55073 304 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 PERM1Q5SV97 790 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 GPRC6AQ5T6X5 926 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 TTC23LQ6PF05 361 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 CYP2R1Q6VVX0 501 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 MACC1Q6ZN28 852 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 USP51Q70EK9 711 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 AQP12AQ8IXF9 295 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 CANT1Q8WVQ1 401 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 CYGBQ8WWM9 190 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 COPS8Q99627 209 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 EGFL8Q99944 293 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 HOXD1Q9GZZ0 328 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 PPIL1Q9Y3C6 166 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 ST14Q9Y5Y6 855 aa16.67■□□□□ 0.26
SHKBP1-205ENST00000594973 RNF103-CHMP3A0A140T963 221 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 CXorf51AA0A1B0GTR3 108 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 M0QX08 132 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 NR5A2O00482 541 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 MRASO14807 208 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 RAD51BO15315 384 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 NUAK1O60285 661 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 KATNA1O75449 491 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 LEFTY1O75610 366 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 HNRNPA1P09651 372 aaKnown RBP eCLIP16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 NSG1P42857 185 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 HSPA7P48741 367 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 ERVPABLB-1P60509 514 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 RPS6KA2Q15349 733 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 ARSIQ5FYB1 569 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 TCEAL5Q5H9L2 206 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 TMTC4Q5T4D3 741 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 SLX4IPQ5VYV7 408 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 ZBTB46Q86UZ6 589 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 SFRP1Q8N474 314 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 ZNF707Q96C28 371 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 CENPNQ96H22 339 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 TXNDC15Q96J42 360 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 HBEGFQ99075 208 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 SLC39A3Q9BRY0 314 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 TRIM15Q9C019 465 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 FANCEQ9HB96 536 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 IFT80Q9P2H3 777 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 SCN8AQ9UQD0 1980 aa16.66■□□□□ 0.26
SHKBP1-205ENST00000594973 KMOO15229 486 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 NRP2O60462 931 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 FASP25445 335 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 GDF5P43026 501 aa16.65■□□□□ 0.26
SHKBP1-205ENST00000594973 B4GALNT1Q00973 533 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms