RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 TRIB2Q92519 343 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 FCGR1BQ92637 280 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 TESCQ96BS2 214 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 DACH2Q96NX9 599 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 SIGLEC11Q96RL6 698 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 PITX2Q99697 317 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 HEPHQ9BQS7 1158 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 CLPBQ9H078 707 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 NSUN3Q9H649 340 aaKnown RBP12.94□□□□□ -0.34
VRK3-209ENST00000594948 IL1RAPQ9NPH3 570 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 ACOT13Q9NPJ3 140 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 SERHLQ9NQF3 203 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 KLQ9UEF7 1012 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 CPA4Q9UI42 421 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 ZMYM5Q9UJ78 669 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 OSGIN1Q9UJX0 560 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 NDRG4Q9ULP0 352 aaKnown RBP12.94□□□□□ -0.34
VRK3-209ENST00000594948 PMF1-BGLAPU3KQ54 211 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 AXIN1O15169 862 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 FZD6O60353 706 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 B4GALT3O60512 393 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 SEMG1P04279 462 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 BCKDHAP12694 445 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 BMP1P13497 986 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 S100A3P33764 101 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 MASP1P48740 699 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 TUBA1BP68363 451 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 ABRQ12979 859 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 MAD2L1BPQ15013 274 aaPredicted RBP12.93□□□□□ -0.34
VRK3-209ENST00000594948 GTDC1Q4AE62 458 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 CTXN3Q4LDR2 81 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 PAGE2BQ5JRK9 111 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 LYPLAL1Q5VWZ2 237 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 ERICH5Q6P6B1 374 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 CXCL17Q6UXB2 119 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 TUBA1AQ71U36 451 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 CYP2U1Q7Z449 544 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 ZNF280BQ86YH2 543 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 RBFAQ8N0V3 343 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 RHOXF1Q8NHV9 184 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 SOCS4Q8WXH5 440 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 HHIPQ96QV1 700 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 SLIRPQ9GZT3 109 aaKnown RBP12.93□□□□□ -0.34
VRK3-209ENST00000594948 SPC25Q9HBM1 224 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 THG1LQ9NWX6 298 aaKnown RBP12.93□□□□□ -0.34
VRK3-209ENST00000594948 VNN3Q9NY84 501 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 WWOXQ9NZC7 414 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 EVLQ9UI08 416 aaPredicted RBP12.93□□□□□ -0.34
VRK3-209ENST00000594948 RPS6KA6Q9UK32 745 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 UGT2A1Q9Y4X1 527 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 PCDHGC4Q9Y5F7 938 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 GMPPBQ9Y5P6 360 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 AP1M2Q9Y6Q5 423 aa12.93□□□□□ -0.34
VRK3-209ENST00000594948 IQCF5A8MTL0 148 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 TAF4O00268 1085 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 AREL1O15033 823 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 KRT6AP02538 564 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 MT-ND2P03891 347 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 KRT6BP04259 564 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 MAPK1P28482 360 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 PTPN6P29350 595 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 HMGCLP35914 325 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 KRT6CP48668 564 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 DAPP51397 102 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 KCNQ1P51787 676 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 FCGRTP55899 365 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 HMGCS1Q01581 520 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 GBX1Q14549 363 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 CARD16Q5EG05 197 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 UBE2UQ5VVX9 321 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 PHACTR4Q8IZ21 702 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 CPA6Q8N4T0 437 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 KRTCAP2Q8N6L1 136 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 TTC9BQ8N6N2 239 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 ATAD1Q8NBU5 361 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 EXOC2Q96KP1 924 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 SMIM14Q96QK8 99 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 TTLL2Q9BWV7 592 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 CWH43Q9H720 699 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 CCSER2Q9H7U1 834 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 BPIFA1Q9NP55 256 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 DNMT3LQ9UJW3 386 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 FBXO10Q9UK96 956 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.92□□□□□ -0.34
VRK3-209ENST00000594948 SERTM1A2A2V5 107 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 OR2A25A4D2G3 310 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 SAGE2PA6NJ88 616 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 TOR1BO14657 336 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 MITFO75030 526 aaPredicted RBP12.92□□□□□ -0.34
VRK3-209ENST00000594948 FAM20BO75063 409 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 SEC24AO95486 1093 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 EPB42P16452 691 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 FMO3P31513 532 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 TGFBR2P37173 567 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 MAP2K4P45985 399 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 TRPC1P48995 793 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 PHC1P78364 1004 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 ZNF177Q13360 481 aaPredicted RBP12.92□□□□□ -0.34
VRK3-209ENST00000594948 ZNF181Q2M3W8 571 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 INAVAQ3KP66 663 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms