RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 CYP2A13Q16696 494 aa24.92■■□□□ 1.58
TRIM28-204ENST00000594806 SLC5A12Q1EHB4 618 aa24.92■■□□□ 1.58
TRIM28-204ENST00000594806 TMTC4Q5T4D3 741 aa24.92■■□□□ 1.58
TRIM28-204ENST00000594806 CEACAM20Q6UY09 585 aa24.92■■□□□ 1.58
TRIM28-204ENST00000594806 PIWIL4Q7Z3Z4 852 aaKnown RBP24.92■■□□□ 1.58
TRIM28-204ENST00000594806 MCOLN3Q8TDD5 553 aa24.92■■□□□ 1.58
TRIM28-204ENST00000594806 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.92■■□□□ 1.58
TRIM28-204ENST00000594806 LINGO1Q96FE5 620 aa24.92■■□□□ 1.58
TRIM28-204ENST00000594806 OR2A14Q96R47 310 aa24.92■■□□□ 1.58
TRIM28-204ENST00000594806 ACSS3Q9H6R3 686 aa24.92■■□□□ 1.58
TRIM28-204ENST00000594806 URB1O60287 2271 aaKnown RBP24.92■■□□□ 1.58
TRIM28-204ENST00000594806 ISM1B1AKI9 464 aa24.91■■□□□ 1.58
TRIM28-204ENST00000594806 PIAS1O75925 651 aa24.91■■□□□ 1.58
TRIM28-204ENST00000594806 ERGP11308 486 aa24.91■■□□□ 1.58
TRIM28-204ENST00000594806 UGT2B7P16662 529 aa24.91■■□□□ 1.58
TRIM28-204ENST00000594806 ZNF37AP17032 561 aaPredicted RBP24.91■■□□□ 1.58
TRIM28-204ENST00000594806 CYP2A7P20853 494 aa24.91■■□□□ 1.58
TRIM28-204ENST00000594806 SLC5A2P31639 672 aa24.91■■□□□ 1.58
TRIM28-204ENST00000594806 TAS2R39P59534 338 aa24.91■■□□□ 1.58
TRIM28-204ENST00000594806 ACY1Q03154 408 aa24.91■■□□□ 1.58
TRIM28-204ENST00000594806 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.91■■□□□ 1.58
TRIM28-204ENST00000594806 UBE2R2Q712K3 238 aaPredicted RBP24.91■■□□□ 1.58
TRIM28-204ENST00000594806 D2HGDHQ8N465 521 aa24.91■■□□□ 1.58
TRIM28-204ENST00000594806 LINC01555Q8NAE3 123 aa24.91■■□□□ 1.58
TRIM28-204ENST00000594806 NRTNQ99748 197 aa24.91■■□□□ 1.58
TRIM28-204ENST00000594806 SLC12A9Q9BXP2 914 aa24.91■■□□□ 1.58
TRIM28-204ENST00000594806 CHRNA10Q9GZZ6 450 aa24.91■■□□□ 1.58
TRIM28-204ENST00000594806 IGF2RP11717 2491 aa24.9■■□□□ 1.58
TRIM28-204ENST00000594806 AGRPO00253 132 aa24.9■■□□□ 1.58
TRIM28-204ENST00000594806 POLR1CO15160 346 aaPredicted RBP24.9■■□□□ 1.58
TRIM28-204ENST00000594806 TSPAN12O95859 305 aa24.9■■□□□ 1.58
TRIM28-204ENST00000594806 TNFRSF8P28908 595 aa24.9■■□□□ 1.58
TRIM28-204ENST00000594806 CCSMST1Q4G0I0 132 aa24.9■■□□□ 1.58
TRIM28-204ENST00000594806 TRMT10CQ7L0Y3 403 aaKnown RBP24.9■■□□□ 1.58
TRIM28-204ENST00000594806 ZNF248Q8NDW4 579 aa24.9■■□□□ 1.58
TRIM28-204ENST00000594806 PARVBQ9HBI1 364 aa24.9■■□□□ 1.58
TRIM28-204ENST00000594806 SPHK1Q9NYA1 384 aa24.9■■□□□ 1.58
TRIM28-204ENST00000594806 MTO1Q9Y2Z2 717 aaKnown RBP24.9■■□□□ 1.58
TRIM28-204ENST00000594806 A0A0J9YY10 115 aa24.89■■□□□ 1.58
TRIM28-204ENST00000594806 C9orf172C9J069 976 aa24.89■■□□□ 1.58
TRIM28-204ENST00000594806 SLU7O95391 586 aaKnown RBP24.89■■□□□ 1.58
TRIM28-204ENST00000594806 ACSL3O95573 720 aa24.89■■□□□ 1.58
TRIM28-204ENST00000594806 MSL3P1P0C860 447 aa24.89■■□□□ 1.58
TRIM28-204ENST00000594806 SAT1P21673 171 aa24.89■■□□□ 1.58
TRIM28-204ENST00000594806 USP10Q14694 798 aaKnown RBP24.89■■□□□ 1.58
TRIM28-204ENST00000594806 FLVCR1-AS1Q8TAF5 88 aa24.89■■□□□ 1.58
TRIM28-204ENST00000594806 DENND1AQ8TEH3 1009 aa24.89■■□□□ 1.58
TRIM28-204ENST00000594806 IL17FQ96PD4 163 aa24.89■■□□□ 1.58
TRIM28-204ENST00000594806 FCRL4Q96PJ5 515 aa24.89■■□□□ 1.58
TRIM28-204ENST00000594806 TRAPPC9Q96Q05 1148 aa24.89■■□□□ 1.58
TRIM28-204ENST00000594806 PKP4Q99569 1192 aa24.89■■□□□ 1.58
TRIM28-204ENST00000594806 GPAMQ9HCL2 828 aa24.89■■□□□ 1.58
TRIM28-204ENST00000594806 PDE7BQ9NP56 450 aa24.89■■□□□ 1.58
TRIM28-204ENST00000594806 ANKRD12Q6UB98 2062 aa24.89■■□□□ 1.57
TRIM28-204ENST00000594806 SLC9B1P1A6NJY1 282 aa24.88■■□□□ 1.57
TRIM28-204ENST00000594806 TLX3O43711 291 aaPredicted RBP24.88■■□□□ 1.57
TRIM28-204ENST00000594806 PRAMEF10O60809 474 aa24.88■■□□□ 1.57
TRIM28-204ENST00000594806 ENO2P09104 434 aaPredicted RBP24.88■■□□□ 1.57
TRIM28-204ENST00000594806 HIST1H2AGP0C0S8 130 aaPredicted RBP24.88■■□□□ 1.57
TRIM28-204ENST00000594806 STMN1P16949 149 aa24.88■■□□□ 1.57
TRIM28-204ENST00000594806 HIST1H2ADP20671 130 aa24.88■■□□□ 1.57
TRIM28-204ENST00000594806 OAS2P29728 719 aaKnown RBP24.88■■□□□ 1.57
TRIM28-204ENST00000594806 FOXM1Q08050 763 aa24.88■■□□□ 1.57
TRIM28-204ENST00000594806 OR8K5Q8NH50 307 aa24.88■■□□□ 1.57
TRIM28-204ENST00000594806 SMPDL3AQ92484 453 aa24.88■■□□□ 1.57
TRIM28-204ENST00000594806 HIST1H2AHQ96KK5 128 aa24.88■■□□□ 1.57
TRIM28-204ENST00000594806 CCDC138Q96M89 665 aa24.88■■□□□ 1.57
TRIM28-204ENST00000594806 HIST1H2AJQ99878 128 aa24.88■■□□□ 1.57
TRIM28-204ENST00000594806 H2AFJQ9BTM1 129 aa24.88■■□□□ 1.57
TRIM28-204ENST00000594806 TRIM54Q9BYV2 358 aa24.88■■□□□ 1.57
TRIM28-204ENST00000594806 INTS7Q9NVH2 962 aaKnown RBP24.88■■□□□ 1.57
TRIM28-204ENST00000594806 SOHLH2Q9NX45 425 aa24.88■■□□□ 1.57
TRIM28-204ENST00000594806 CIDEBQ9UHD4 219 aa24.88■■□□□ 1.57
TRIM28-204ENST00000594806 ADAMTS20P59510 1910 aa24.88■■□□□ 1.57
TRIM28-204ENST00000594806 SNRNP200O75643 2136 aaKnown RBP24.88■■□□□ 1.57
TRIM28-204ENST00000594806 MAP1BP46821 2468 aaKnown RBP24.87■■□□□ 1.57
TRIM28-204ENST00000594806 A0A087WUV0 522 aaPredicted RBP24.87■■□□□ 1.57
TRIM28-204ENST00000594806 PABPN1LA6NDY0 278 aaKnown RBP24.87■■□□□ 1.57
TRIM28-204ENST00000594806 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.87■■□□□ 1.57
TRIM28-204ENST00000594806 TAF4O00268 1085 aa24.87■■□□□ 1.57
TRIM28-204ENST00000594806 RRP8O43159 456 aaKnown RBP24.87■■□□□ 1.57
TRIM28-204ENST00000594806 PRICKLE3O43900 615 aaPredicted RBP24.87■■□□□ 1.57
TRIM28-204ENST00000594806 ABHD2P08910 425 aa24.87■■□□□ 1.57
TRIM28-204ENST00000594806 FGF5P12034 268 aa24.87■■□□□ 1.57
TRIM28-204ENST00000594806 PEBP1P30086 187 aaKnown RBP24.87■■□□□ 1.57
TRIM28-204ENST00000594806 PNLIPRP1P54315 467 aa24.87■■□□□ 1.57
TRIM28-204ENST00000594806 AP1S2P56377 157 aa24.87■■□□□ 1.57
TRIM28-204ENST00000594806 NAA25Q14CX7 972 aa24.87■■□□□ 1.57
TRIM28-204ENST00000594806 CCDC91Q7Z6B0 441 aa24.87■■□□□ 1.57
TRIM28-204ENST00000594806 CEP97Q8IW35 865 aa24.87■■□□□ 1.57
TRIM28-204ENST00000594806 TCTN2Q96GX1 697 aa24.87■■□□□ 1.57
TRIM28-204ENST00000594806 PPM1MQ96MI6 270 aa24.87■■□□□ 1.57
TRIM28-204ENST00000594806 OR6C1Q96RD1 312 aa24.87■■□□□ 1.57
TRIM28-204ENST00000594806 RARRES3Q9UL19 164 aa24.87■■□□□ 1.57
TRIM28-204ENST00000594806 ZMIZ1Q9ULJ6 1067 aa24.87■■□□□ 1.57
TRIM28-204ENST00000594806 NOVA2Q9UNW9 492 aaKnown RBP24.87■■□□□ 1.57
TRIM28-204ENST00000594806 B3GALT1Q9Y5Z6 326 aa24.87■■□□□ 1.57
TRIM28-204ENST00000594806 AHCTF1Q8WYP5 2266 aa24.87■■□□□ 1.57
TRIM28-204ENST00000594806 SYF2O95926 243 aaKnown RBP24.86■■□□□ 1.57
TRIM28-204ENST00000594806 ST6GAL1P15907 406 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms