RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CSF2RBP32927 897 aa19.08■□□□□ 0.64
LSM4-203ENST00000593829 INHBCP55103 352 aa19.08■□□□□ 0.64
LSM4-203ENST00000593829 CFHR1Q03591 330 aa19.08■□□□□ 0.64
LSM4-203ENST00000593829 CAMK2BQ13554 666 aa19.08■□□□□ 0.64
LSM4-203ENST00000593829 PLCL1Q15111 1095 aa19.08■□□□□ 0.64
LSM4-203ENST00000593829 WDR74Q6RFH5 385 aaPredicted RBP19.08■□□□□ 0.64
LSM4-203ENST00000593829 CAPN12Q6ZSI9 719 aa19.08■□□□□ 0.64
LSM4-203ENST00000593829 TMPRSS9Q7Z410 1059 aa19.08■□□□□ 0.64
LSM4-203ENST00000593829 B3GNT8Q7Z7M8 397 aa19.08■□□□□ 0.64
LSM4-203ENST00000593829 VRK3Q8IV63 474 aa19.08■□□□□ 0.64
LSM4-203ENST00000593829 OR4D9Q8NGE8 314 aa19.08■□□□□ 0.64
LSM4-203ENST00000593829 FAM136AQ96C01 138 aa19.08■□□□□ 0.64
LSM4-203ENST00000593829 LATS2Q9NRM7 1088 aa19.08■□□□□ 0.64
LSM4-203ENST00000593829 HAO1Q9UJM8 370 aa19.08■□□□□ 0.64
LSM4-203ENST00000593829 ASF1AQ9Y294 204 aa19.08■□□□□ 0.64
LSM4-203ENST00000593829 COL27A1Q8IZC6 1860 aaPredicted RBP19.07■□□□□ 0.64
LSM4-203ENST00000593829 AHSGP02765 367 aa19.07■□□□□ 0.64
LSM4-203ENST00000593829 GSTA2P09210 222 aa19.07■□□□□ 0.64
LSM4-203ENST00000593829 TYRP1P17643 537 aa19.07■□□□□ 0.64
LSM4-203ENST00000593829 GABRB3P28472 473 aa19.07■□□□□ 0.64
LSM4-203ENST00000593829 SSTR1P30872 391 aa19.07■□□□□ 0.64
LSM4-203ENST00000593829 CCKBRP32239 447 aa19.07■□□□□ 0.64
LSM4-203ENST00000593829 ZFP36L1Q07352 338 aaKnown RBP19.07■□□□□ 0.64
LSM4-203ENST00000593829 TMEM71Q6P5X7 295 aa19.07■□□□□ 0.64
LSM4-203ENST00000593829 C3orf62Q6ZUJ4 267 aa19.07■□□□□ 0.64
LSM4-203ENST00000593829 SLITRK4Q8IW52 837 aa19.07■□□□□ 0.64
LSM4-203ENST00000593829 PHC3Q8NDX5 983 aa19.07■□□□□ 0.64
LSM4-203ENST00000593829 KCNJ9Q92806 393 aa19.07■□□□□ 0.64
LSM4-203ENST00000593829 ATXN7L3BQ96GX2 97 aa19.07■□□□□ 0.64
LSM4-203ENST00000593829 STRADBQ9C0K7 418 aa19.07■□□□□ 0.64
LSM4-203ENST00000593829 SLC17A6Q9P2U8 582 aa19.07■□□□□ 0.64
LSM4-203ENST00000593829 HOXB3P14651 431 aaPredicted RBP19.06■□□□□ 0.64
LSM4-203ENST00000593829 KLHL35Q6PF15 583 aa19.06■□□□□ 0.64
LSM4-203ENST00000593829 ZNF574Q6ZN55 896 aaPredicted RBP19.06■□□□□ 0.64
LSM4-203ENST00000593829 CYS1Q717R9 158 aa19.06■□□□□ 0.64
LSM4-203ENST00000593829 ZBTB2Q8N680 514 aa19.06■□□□□ 0.64
LSM4-203ENST00000593829 ACVR1CQ8NER5 493 aa19.06■□□□□ 0.64
LSM4-203ENST00000593829 AARSD1Q9BTE6 412 aaKnown RBP19.06■□□□□ 0.64
LSM4-203ENST00000593829 SEMA6CQ9H3T2 930 aa19.06■□□□□ 0.64
LSM4-203ENST00000593829 DCLRE1BQ9H816 532 aa19.06■□□□□ 0.64
LSM4-203ENST00000593829 PSMC3IPQ9P2W1 217 aaPredicted RBP19.06■□□□□ 0.64
LSM4-203ENST00000593829 UNC13CQ8NB66 2214 aa19.06■□□□□ 0.64
LSM4-203ENST00000593829 SPAG7O75391 227 aa19.06■□□□□ 0.64
LSM4-203ENST00000593829 CLCN7P51798 805 aa19.06■□□□□ 0.64
LSM4-203ENST00000593829 LIMK2P53671 638 aa19.06■□□□□ 0.64
LSM4-203ENST00000593829 PHF19Q5T6S3 580 aa19.06■□□□□ 0.64
LSM4-203ENST00000593829 PLXDC1Q8IUK5 500 aa19.06■□□□□ 0.64
LSM4-203ENST00000593829 TBC1D21Q8IYX1 336 aa19.06■□□□□ 0.64
LSM4-203ENST00000593829 ZNF483Q8TF39 744 aaPredicted RBP19.06■□□□□ 0.64
LSM4-203ENST00000593829 JPH3Q8WXH2 748 aaPredicted RBP19.06■□□□□ 0.64
LSM4-203ENST00000593829 PAIP2Q9BPZ3 127 aaKnown RBP19.06■□□□□ 0.64
LSM4-203ENST00000593829 TRIT1Q9H3H1 467 aaKnown RBP19.06■□□□□ 0.64
LSM4-203ENST00000593829 NSMCE4AQ9NXX6 385 aa19.06■□□□□ 0.64
LSM4-203ENST00000593829 KLHL42Q9P2K6 505 aa19.06■□□□□ 0.64
LSM4-203ENST00000593829 GALPQ9UBC7 116 aa19.06■□□□□ 0.64
LSM4-203ENST00000593829 GRID1Q9ULK0 1009 aa19.06■□□□□ 0.64
LSM4-203ENST00000593829 IGHV5-10-1A0A0J9YXX1 117 aa19.05■□□□□ 0.64
LSM4-203ENST00000593829 TRABD2BA6NFA1 517 aa19.05■□□□□ 0.64
LSM4-203ENST00000593829 LINGO3P0C6S8 592 aa19.05■□□□□ 0.64
LSM4-203ENST00000593829 CAPZBP47756 277 aa19.05■□□□□ 0.64
LSM4-203ENST00000593829 ABRQ12979 859 aa19.05■□□□□ 0.64
LSM4-203ENST00000593829 TSNAXIP1Q2TAA8 658 aa19.05■□□□□ 0.64
LSM4-203ENST00000593829 SLC26A11Q86WA9 606 aa19.05■□□□□ 0.64
LSM4-203ENST00000593829 OR5AR1Q8NGP9 310 aa19.05■□□□□ 0.64
LSM4-203ENST00000593829 OR5K2Q8NHB8 316 aa19.05■□□□□ 0.64
LSM4-203ENST00000593829 ZNF75CPQ92670 426 aaPredicted RBP19.05■□□□□ 0.64
LSM4-203ENST00000593829 CDKL2Q92772 493 aa19.05■□□□□ 0.64
LSM4-203ENST00000593829 LIN37Q96GY3 246 aaPredicted RBP19.05■□□□□ 0.64
LSM4-203ENST00000593829 NRSN2Q9GZP1 204 aa19.05■□□□□ 0.64
LSM4-203ENST00000593829 SLC24A3Q9HC58 644 aa19.05■□□□□ 0.64
LSM4-203ENST00000593829 SLCO1B3Q9NPD5 702 aa19.05■□□□□ 0.64
LSM4-203ENST00000593829 TMEM9Q9P0T7 183 aa19.05■□□□□ 0.64
LSM4-203ENST00000593829 POLG2Q9UHN1 485 aa19.05■□□□□ 0.64
LSM4-203ENST00000593829 MED16Q9Y2X0 877 aa19.05■□□□□ 0.64
LSM4-203ENST00000593829 TCRBV9S1A1TA0A576 114 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 VPS26AO75436 327 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 SKAP2O75563 359 aaPredicted RBP19.04■□□□□ 0.64
LSM4-203ENST00000593829 KRT15P19012 456 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 MPSTP25325 297 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 RPA3P35244 121 aaPredicted RBP19.04■□□□□ 0.64
LSM4-203ENST00000593829 GPX6P59796 221 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 PRKG2Q13237 762 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 GBX1Q14549 363 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 TTLL9Q3SXZ7 439 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 HHATQ5VTY9 493 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 SKA2Q8WVK7 121 aaPredicted RBP19.04■□□□□ 0.64
LSM4-203ENST00000593829 LCN9Q8WX39 176 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 RSC1A1Q92681 617 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 GATA6Q92908 595 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 NDNQ99608 321 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 HGH1Q9BTY7 390 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 TFB2MQ9H5Q4 396 aaKnown RBP19.04■□□□□ 0.64
LSM4-203ENST00000593829 PDP2Q9P2J9 529 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 KNTC1P50748 2209 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 SPAG6O75602 509 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 RPN2P04844 631 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 THRAP10827 490 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 TRA2AQ13595 282 aaKnown RBP eCLIP19.04■□□□□ 0.64
LSM4-203ENST00000593829 UNC5DQ6UXZ4 953 aa19.04■□□□□ 0.64
LSM4-203ENST00000593829 STRA8Q7Z7C7 330 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms