RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 GK3PQ14409 553 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 GRIN2CQ14957 1233 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 FNDC3BQ53EP0 1204 aaKnown RBP19.18■□□□□ 0.66
CLIP3-206ENST00000593074 SPANXN4Q5MJ08 99 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 ZNF648Q5T619 568 aaPredicted RBP19.18■□□□□ 0.66
CLIP3-206ENST00000593074 ZBTB49Q6ZSB9 765 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 EPHX4Q8IUS5 362 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 RAVER1Q8IY67 606 aaKnown RBP19.18■□□□□ 0.66
CLIP3-206ENST00000593074 GLMNQ92990 594 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 MTFMTQ96DP5 389 aaKnown RBP19.18■□□□□ 0.66
CLIP3-206ENST00000593074 CENPNQ96H22 339 aaPredicted RBP19.18■□□□□ 0.66
CLIP3-206ENST00000593074 MAGEB10Q96LZ2 347 aaPredicted RBP19.18■□□□□ 0.66
CLIP3-206ENST00000593074 ZNF696Q9H7X3 374 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 VAPAQ9P0L0 249 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 ANAPC2Q9UJX6 822 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 SLC22A14Q9Y267 594 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 KRT87PA6NCN2 255 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 OTOL1A6NHN0 477 aaPredicted RBP19.17■□□□□ 0.66
CLIP3-206ENST00000593074 KPNA3O00505 521 aaPredicted RBP19.17■□□□□ 0.66
CLIP3-206ENST00000593074 SOCS2O14508 198 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 TSPAN6O43657 245 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 PRAMEF4O60810 478 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 TNFAIP8O95379 198 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 PRNPP04156 253 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 CKMT2P17540 419 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 GRIA2P42262 883 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 CCT8P50990 548 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 PFN3P60673 137 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 MYBPC1Q00872 1141 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 GAB4Q2WGN9 574 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 PLA2G4EQ3MJ16 856 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 SLC44A4Q53GD3 710 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 PRAMEF9Q5VWM5 478 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 GET4Q7L5D6 327 aaPredicted RBP19.17■□□□□ 0.66
CLIP3-206ENST00000593074 KRTCAP2Q8N6L1 136 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 RASGEF1AQ8N9B8 481 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 YIPF3Q9GZM5 350 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 OBP2AQ9NY56 170 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 GDE1Q9NZC3 331 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 ITM2BQ9Y287 266 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 CHD9Q3L8U1 2897 aa19.17■□□□□ 0.66
CLIP3-206ENST00000593074 ARHGEF33A8MVX0 844 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 H0Y858 1186 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 SPINT1O43278 529 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 ATG13O75143 517 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 ACPPP15309 386 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 PSMC3P17980 439 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 CTSCP53634 463 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 MAPKAPK3Q16644 382 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 RALGPS2Q86X27 583 aaPredicted RBP19.16■□□□□ 0.66
CLIP3-206ENST00000593074 ST13P5Q8NFI4 369 aaPredicted RBP19.16■□□□□ 0.66
CLIP3-206ENST00000593074 AP2M1Q96CW1 435 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 CCDC115Q96NT0 180 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 IGFLR1Q9H665 355 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 DZANK1Q9NVP4 752 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 ZFC3H1O60293 1989 aaKnown RBP19.16■□□□□ 0.66
CLIP3-206ENST00000593074 WNT9AO14904 365 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 DFNA5O60443 496 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 UGDHO60701 494 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 PCSK2P16519 638 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 ITPKAP23677 461 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 ACOX1Q15067 660 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 PDGFRLQ15198 375 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 LIN52Q52LA3 116 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.16■□□□□ 0.66
CLIP3-206ENST00000593074 CARM1Q86X55 608 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 CMTM7Q96FZ5 175 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 COQ10AQ96MF6 247 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 CENPKQ9BS16 269 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 TRPV4Q9HBA0 871 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 DLGAP4Q9Y2H0 992 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 TMED5Q9Y3A6 229 aa19.16■□□□□ 0.66
CLIP3-206ENST00000593074 SLC5A10A0PJK1 596 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 TPST1O60507 370 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 FAM58BPP0C7Q3 252 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 PRPS2P11908 318 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 CLDN8P56748 225 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 RPS14P62263 151 aaKnown RBP19.15■□□□□ 0.66
CLIP3-206ENST00000593074 EIF4HQ15056 248 aaKnown RBP19.15■□□□□ 0.66
CLIP3-206ENST00000593074 HNRNPA1L2Q32P51 320 aaKnown RBP19.15■□□□□ 0.66
CLIP3-206ENST00000593074 SYTL3Q4VX76 610 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 FRG2Q64ET8 278 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 TBC1D21Q8IYX1 336 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 FAM9CQ8IZT9 166 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 DTWD1Q8N5C7 304 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 AADATQ8N5Z0 425 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 MFSD2AQ8NA29 543 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 TMEM159Q96B96 161 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 BIRC7Q96CA5 298 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 DTD2Q96FN9 168 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 FRG2BQ96QU4 278 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 CDCA3Q99618 268 aaPredicted RBP19.15■□□□□ 0.66
CLIP3-206ENST00000593074 CCM2Q9BSQ5 444 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 ATG10Q9H0Y0 220 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 PIF1Q9H611 641 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 EDDM13A0A1B0GTR0 161 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 FAM149AA5PLN7 773 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 SAC3D1A6NKF1 404 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 AREL1O15033 823 aa19.15■□□□□ 0.66
CLIP3-206ENST00000593074 KIF1CO43896 1103 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms