RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 ARSFP54793 590 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 CDK16Q00536 496 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 SNX1Q13596 522 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 SEMA3AQ14563 771 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 SIX1Q15475 284 aaPredicted RBP12.78□□□□□ -0.36
APOC1-209ENST00000592885 VWA5B1Q5TIE3 1220 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 YOD1Q5VVQ6 348 aaPredicted RBP12.78□□□□□ -0.36
APOC1-209ENST00000592885 MRPL14Q6P1L8 145 aaKnown RBP12.78□□□□□ -0.36
APOC1-209ENST00000592885 TTC23LQ6PF05 361 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 NAPRTQ6XQN6 538 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 RAB42Q8N4Z0 105 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 LINC01555Q8NAE3 123 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 CLEC1AQ8NC01 280 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 FDCSPQ8NFU4 85 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 GSDMBQ8TAX9 411 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 FKBP10Q96AY3 582 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 NUDT9Q9BW91 350 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 SPRTNQ9H040 489 aaPredicted RBP12.78□□□□□ -0.36
APOC1-209ENST00000592885 P2RY12Q9H244 342 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 MRM3Q9HC36 420 aaKnown RBP12.78□□□□□ -0.36
APOC1-209ENST00000592885 TREX1Q9NSU2 369 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 IRAK4Q9NWZ3 460 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 EURLQ9NYK6 297 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 IFT80Q9P2H3 777 aaPredicted RBP12.78□□□□□ -0.36
APOC1-209ENST00000592885 PLAGL1Q9UM63 463 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 MAP4K5Q9Y4K4 846 aa12.78□□□□□ -0.36
APOC1-209ENST00000592885 PCSK5Q92824 1860 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 A0A1B0GX78 115 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 PEX12O00623 359 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 PFDN6O15212 129 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 ZNF185O15231 689 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 CD3EAPO15446 510 aaKnown RBP12.77□□□□□ -0.37
APOC1-209ENST00000592885 IPO13O94829 963 aaKnown RBP12.77□□□□□ -0.37
APOC1-209ENST00000592885 ALPPP05187 535 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 PIM1P11309 404 aaPredicted RBP12.77□□□□□ -0.37
APOC1-209ENST00000592885 ETS1P14921 441 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 MAGP20916 626 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 OTX2P32243 289 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 RPL22P35268 128 aaKnown RBP12.77□□□□□ -0.37
APOC1-209ENST00000592885 CCNFP41002 786 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 NPY2RP49146 381 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 CSE1LP55060 971 aaKnown RBP12.77□□□□□ -0.37
APOC1-209ENST00000592885 GRB7Q14451 532 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 NAA25Q14CX7 972 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 NADK2Q4G0N4 442 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 NKAIN1Q4KMZ8 207 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 ZC3H12BQ5HYM0 836 aaKnown RBP12.77□□□□□ -0.37
APOC1-209ENST00000592885 TCTE1Q5JU00 501 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 RNF187Q5TA31 235 aaPredicted RBP12.77□□□□□ -0.37
APOC1-209ENST00000592885 MLIPQ5VWP3 458 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 PTRHD1Q6GMV3 140 aaKnown RBP12.77□□□□□ -0.37
APOC1-209ENST00000592885 JMJD6Q6NYC1 403 aaPredicted RBP12.77□□□□□ -0.37
APOC1-209ENST00000592885 VRK3Q8IV63 474 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 ZNF655Q8N720 491 aaPredicted RBP12.77□□□□□ -0.37
APOC1-209ENST00000592885 LKAAEAR1Q8TD35 194 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 PNPLA2Q96AD5 504 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 RAD51AP1Q96B01 352 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 PTERQ96BW5 349 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 CHRAC1Q9NRG0 131 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 HOMER3Q9NSC5 361 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 BFARQ9NZS9 450 aa12.77□□□□□ -0.37
APOC1-209ENST00000592885 PTRH2Q9Y3E5 179 aaKnown RBP12.77□□□□□ -0.37
APOC1-209ENST00000592885 RELNP78509 3460 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 H3BMM5 538 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 HCRTR1O43613 425 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 NDUFS3O75489 264 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 ONECUT2O95948 504 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 ALBP02768 609 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 GP1BBP13224 206 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 TPSB2P20231 275 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 ATP5DP30049 168 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 SOX8P57073 446 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 SESN2P58004 480 aaPredicted RBP12.76□□□□□ -0.37
APOC1-209ENST00000592885 BASP1P80723 227 aaKnown RBP12.76□□□□□ -0.37
APOC1-209ENST00000592885 MYBPC3Q14896 1274 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 TPSAB1Q15661 275 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 DCAF10Q5QP82 559 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 C1orf189Q5VU69 101 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 FAM69BQ5VUD6 431 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 SLC6A19Q695T7 634 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 MRNIPQ6NTE8 343 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 PRUNE1Q86TP1 453 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 HMGCLL1Q8TB92 370 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 MAGEC3Q8TD91 643 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 FOPNLQ96NB1 174 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 KIFC1Q9BW19 673 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 SLC29A3Q9BZD2 475 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 WDR54Q9H977 334 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 SPATA7Q9P0W8 599 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.76□□□□□ -0.37
APOC1-209ENST00000592885 MARCH4Q9P2E8 410 aaPredicted RBP12.76□□□□□ -0.37
APOC1-209ENST00000592885 DHCR7Q9UBM7 475 aaKnown RBP12.76□□□□□ -0.37
APOC1-209ENST00000592885 SLC39A10Q9ULF5 831 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 KLK4Q9Y5K2 254 aa12.76□□□□□ -0.37
APOC1-209ENST00000592885 IQCF5A8MTL0 148 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 TARM1B6A8C7 271 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 DSCR3O14972 297 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 FGGP02679 453 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 CCDC175P0C221 793 aa12.75□□□□□ -0.37
APOC1-209ENST00000592885 ZSCAN5DPP0CG00 497 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms