RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 CRLS1Q9UJA2 301 aa12.23□□□□□ -0.45
PRKCSH-210ENST00000589990 TRAV17A0A0B4J275 112 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 C17orf113A0A1B0GUU1 675 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 KLHL33A6NCF5 533 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 VSTM2BA6NLU5 285 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 ISM1B1AKI9 464 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 PPP1R12AO14974 1030 aaPredicted RBP12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 CBFA2T2O43439 604 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 SLC19A2O60779 497 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 HPP00738 406 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 EPOP01588 193 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 ALBP02768 609 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 PRR35P0CG20 571 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 ATP1B2P14415 290 aaPredicted RBP12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 CAPN3P20807 821 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 CD151P48509 253 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 ST13P50502 369 aaKnown RBP12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 KLC1Q07866 573 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 SLC5A12Q1EHB4 618 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 LAPTM4BQ86VI4 370 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 MCATQ8IVS2 390 aaKnown RBP12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 ZNF567Q8N184 647 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 C2orf73Q8N5S3 287 aaPredicted RBP12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 RNF25Q96BH1 459 aaPredicted RBP12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 MRM3Q9HC36 420 aaKnown RBP12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 MCCC2Q9HCC0 563 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 CUTCQ9NTM9 273 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 ABI3Q9P2A4 366 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 NENFQ9UMX5 172 aa12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 TDRKHQ9Y2W6 561 aaKnown RBP12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 PRRC2AP48634 2157 aaKnown RBP12.22□□□□□ -0.45
PRKCSH-210ENST00000589990 DYTNA2CJ06 578 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 FFAR3O14843 346 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 DSCR3O14972 297 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 GPR42O15529 346 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 CLDN14O95500 239 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 WDPCPO95876 746 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 PYGMP11217 842 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 COX6A1P12074 109 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 ACPPP15309 386 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 ACADLP28330 430 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 SHMT2P34897 504 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 ART1P52961 327 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 CSNK1G2P78368 415 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 BRD3Q15059 726 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 FAAH2Q6GMR7 532 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 ALKBH5Q6P6C2 394 aaKnown RBP12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 RFX6Q8HWS3 928 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 ACBD4Q8NC06 268 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 NRGNQ92686 78 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 HAS2Q92819 552 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 FCRL5Q96RD9 977 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 COPS8Q99627 209 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 CRB3Q9BUF7 120 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 FICDQ9BVA6 458 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 TSPAN10Q9H1Z9 355 aaPredicted RBP12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 C10orf88Q9H8K7 445 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 PRSS21Q9Y6M0 314 aa12.21□□□□□ -0.45
PRKCSH-210ENST00000589990 IGLV3-16A0A075B6K0 115 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 NRP2O60462 931 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 RASAL1O95294 804 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 KRT1P04264 644 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 ESRRAP11474 423 aaPredicted RBP12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 EEF1A2Q05639 463 aaKnown RBP12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 MSLNQ13421 630 aaPredicted RBP12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 MESDQ14696 234 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 TAF1AQ15573 450 aaPredicted RBP12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 INAQ16352 499 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 ATG9BQ674R7 924 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 MTFR2Q6P444 385 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 MFSD7Q6UXD7 560 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 MEX3BQ6ZN04 569 aaKnown RBP12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 TAX1BP1Q86VP1 789 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 KBTBD2Q8IY47 623 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 LINC01555Q8NAE3 123 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 STT3BQ8TCJ2 826 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 CHTF18Q8WVB6 975 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 DLG3Q92796 817 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 TMUB1Q9BVT8 246 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 TRIM5Q9C035 493 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 KLHL8Q9P2G9 620 aaPredicted RBP12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 ASF1AQ9Y294 204 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 HYOU1Q9Y4L1 999 aa12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 FLNAP21333 2647 aaKnown RBP12.2□□□□□ -0.46
PRKCSH-210ENST00000589990 ZNF487B1APH4 448 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 BHMG1C9JSJ3 638 aaPredicted RBP12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 MAP2K7O14733 419 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 ITGAMP11215 1152 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 RALBP11234 206 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 AGAP20933 346 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 ZNF140P52738 457 aaPredicted RBP12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 EFNA3P52797 238 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 ARSFP54793 590 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 HIBCHQ6NVY1 386 aaPredicted RBP12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 C3P1Q6ZMU1 363 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 PID1Q7Z2X4 250 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 SERPINA9Q86WD7 417 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms