RNA–Protein interactions for RNA: ENST00000589934.1

APBA3-204, Transcript of amyloid beta precursor protein binding family A member 3, human

TSL 2

Gene APBA3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBA3-204	ENST00000589934	ADGRF3	Q8IZF5	1079 aa		12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	EID2	Q8N6I1	236 aa		12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	PTGR2	Q8N8N7	351 aa	Predicted RBP	12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	ANKRD42	Q8N9B4	389 aa		12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	OR2L8	Q8NGY9	312 aa		12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	JPH3	Q8WXH2	748 aa	Predicted RBP	12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	ESAM	Q96AP7	390 aa		12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	CXorf40B	Q96DE9	158 aa		12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	TMEM237	Q96Q45	408 aa		12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	OR4K3	Q96R72	315 aa		12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	SELENOS	Q9BQE4	189 aa		12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	TRIM54	Q9BYV2	358 aa		12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	PITPNM3	Q9BZ71	974 aa		12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	CD244	Q9BZW8	370 aa		12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	IQCG	Q9H095	443 aa	Known RBP	12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	XKR8	Q9H6D3	395 aa		12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	INTS7	Q9NVH2	962 aa	Known RBP	12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	CD274	Q9NZQ7	290 aa		12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	NCDN	Q9UBB6	729 aa		12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	DOLK	Q9UPQ8	538 aa		12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	GVINP1	Q7Z2Y8	2422 aa		12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	GOLGA4	Q13439	2230 aa	Known RBP	12.8	□□□□□ -0.36
APBA3-204	ENST00000589934	ASXL3	Q9C0F0	2248 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	EME2	A4GXA9	379 aa	Predicted RBP	12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	NCF1B	A6NI72	391 aa	Predicted RBP	12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	LILRA5	A6NI73	299 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	NCF1C	A8MVU1	366 aa	Predicted RBP	12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	SUPT3H	B4E1H0	165 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	BTN3A3	O00478	584 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	E2F3	O00716	465 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	GDF9	O60383	454 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	PRAMEF4	O60810	478 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	SUPT3H	O75486	399 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	MYL2	P10916	166 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	NCF1	P14598	390 aa	Predicted RBP	12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	GLB1	P16278	677 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	HIST1H2AD	P20671	130 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	GDF5	P43026	501 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	PNLIPRP1	P54315	467 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	HERVK_113	P63132	956 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	PCDH1	Q08174	1060 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	PTCHD3	Q3KNS1	767 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	FBXO48	Q5FWF7	155 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	PRAMEF9	Q5VWM5	478 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	ANKS6	Q68DC2	871 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	FRA10AC1	Q70Z53	315 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	TCAIM	Q8N3R3	496 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	FBXO39	Q8N4B4	442 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	AVL9	Q8NBF6	648 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	PPFIBP2	Q8ND30	876 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	ZNF483	Q8TF39	744 aa	Predicted RBP	12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	EXT2	Q93063	718 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	PHF21B	Q96EK2	531 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	HIST1H2AH	Q96KK5	128 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	HIST1H2AJ	Q99878	128 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	H2AFJ	Q9BTM1	129 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	EDEM2	Q9BV94	578 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	GATA5	Q9BWX5	397 aa	Predicted RBP	12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	ERVK-6	Q9BXR3	956 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	ATG10	Q9H0Y0	220 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	GSTO2	Q9H4Y5	243 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	ZBTB26	Q9HCK0	441 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	SPHK1	Q9NYA1	384 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	NKIRAS1	Q9NYS0	192 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	OR6C2	Q9NZP2	312 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	NCKIPSD	Q9NZQ3	722 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	RAPGEFL1	Q9UHV5	662 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	PCTP	Q9UKL6	214 aa		12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	TDRKH	Q9Y2W6	561 aa	Known RBP	12.79	□□□□□ -0.36
APBA3-204	ENST00000589934	COL5A1	P20908	1838 aa	Predicted RBP	12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	FAM221B	A6H8Z2	402 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	CASC3	O15234	703 aa	Known RBP	12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	B4GAT1	O43505	415 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	TRIM13	O60858	407 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	SMIM24	O75264	130 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	CKMT1A	P12532	417 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	PNLIP	P16233	465 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	NPPB	P16860	134 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	TAC1	P20366	129 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	HSD17B2	P37059	387 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	HSPA7	P48741	367 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	ATP1A2	P50993	1020 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	CFHR1	Q03591	330 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	SQSTM1	Q13501	440 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	E2F2	Q14209	437 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	LIPM	Q5VYY2	423 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	TTC23L	Q6PF05	361 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	AMIGO1	Q86WK6	493 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	ZNF761	Q86XN6	746 aa	Predicted RBP	12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	SLC22A9	Q8IVM8	553 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	LSMEM2	Q8N112	164 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	OR4E2	Q8NGC2	313 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	MGARP	Q8TDB4	240 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	CKAP2	Q8WWK9	683 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	ATL1	Q8WXF7	558 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	PYCR2	Q96C36	320 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	CCDC126	Q96EE4	140 aa		12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	NSUN5	Q96P11	429 aa	Known RBP	12.78	□□□□□ -0.36
APBA3-204	ENST00000589934	TBC1D10A	Q9BXI6	508 aa		12.78	□□□□□ -0.36

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