RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 OR52E1Q8NGJ3 308 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 OR5AR1Q8NGP9 310 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 CFAP61Q8NHU2 1237 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 LKAAEAR1Q8TD35 194 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 SKA2Q8WVK7 121 aaPredicted RBP10.07□□□□□ -0.8
SDF2-208ENST00000589788 SEC14L1Q92503 715 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 LPGAT1Q92604 370 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 TEFMQ96QE5 360 aaKnown RBP10.07□□□□□ -0.8
SDF2-208ENST00000589788 EBNA1BP2Q99848 306 aaKnown RBP10.07□□□□□ -0.8
SDF2-208ENST00000589788 FAM167BQ9BTA0 163 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 CCDC68Q9H2F9 335 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 TFB2MQ9H5Q4 396 aaKnown RBP10.07□□□□□ -0.8
SDF2-208ENST00000589788 FBXO8Q9NRD0 319 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 INTS10Q9NVR2 710 aaKnown RBP10.07□□□□□ -0.8
SDF2-208ENST00000589788 FOXJ2Q9P0K8 574 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 ACSL6Q9UKU0 697 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 TDRKHQ9Y2W6 561 aaKnown RBP10.07□□□□□ -0.8
SDF2-208ENST00000589788 UTP11Q9Y3A2 253 aaKnown RBP10.07□□□□□ -0.8
SDF2-208ENST00000589788 PCDHGA3Q9Y5H0 932 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 B3GALT1Q9Y5Z6 326 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 FAM169AQ9Y6X4 670 aa10.07□□□□□ -0.8
SDF2-208ENST00000589788 TLCD2A6NGC4 264 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 E5RI56 91 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 STMND1H3BQB6 276 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 GPC4O75487 556 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 BANF1O75531 89 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 SLCO2B1O94956 709 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 SEC31AO94979 1220 aaKnown RBP10.06□□□□□ -0.8
SDF2-208ENST00000589788 RHOXF2BP0C7M4 288 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 LIPCP11150 499 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 NELFEP18615 380 aaKnown RBP10.06□□□□□ -0.8
SDF2-208ENST00000589788 CHRM3P20309 590 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 SHMT2P34897 504 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 ADARP55265 1226 aaKnown RBP10.06□□□□□ -0.8
SDF2-208ENST00000589788 ARL4CP56559 192 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 TMPRSS3P57727 454 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 MRPS25P82663 173 aaKnown RBP10.06□□□□□ -0.8
SDF2-208ENST00000589788 SLC7A5Q01650 507 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 ABRQ12979 859 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 CTBP1Q13363 440 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 CRYMQ14894 314 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 SPANXN3Q5MJ09 141 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 CTSL3PQ5NE16 218 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 ZNF468Q5VIY5 522 aaPredicted RBP10.06□□□□□ -0.8
SDF2-208ENST00000589788 HIBCHQ6NVY1 386 aaPredicted RBP10.06□□□□□ -0.8
SDF2-208ENST00000589788 CYB5D1Q6P9G0 228 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 CENPUQ71F23 418 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 KCNMB4Q86W47 210 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 AMIGO1Q86WK6 493 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 KMT5CQ86Y97 462 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 VRK3Q8IV63 474 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 SIDT2Q8NBJ9 832 aaKnown RBP10.06□□□□□ -0.8
SDF2-208ENST00000589788 OR5K2Q8NHB8 316 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 KLHL6Q8WZ60 621 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 FAM136AQ96C01 138 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 BIRC8Q96P09 236 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 MAP3K3Q99759 626 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 CTRCQ99895 268 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 RHOXF2Q9BQY4 288 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 ERP44Q9BS26 406 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 ZPBPQ9BS86 351 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 XKR8Q9H6D3 395 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 ANKZF1Q9H8Y5 726 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.06□□□□□ -0.8
SDF2-208ENST00000589788 SNX24Q9Y343 169 aa10.06□□□□□ -0.8
SDF2-208ENST00000589788 V9GYY5 206 aaPredicted RBP10.06□□□□□ -0.8
SDF2-208ENST00000589788 AHCTF1Q8WYP5 2266 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 IGHV5-51A0A0C4DH38 117 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 C2orf74A8MZ97 194 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 BTN3A1O00481 513 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 NIPSNAP2O75323 286 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 PKMP14618 531 aaKnown RBP10.05□□□□□ -0.8
SDF2-208ENST00000589788 CDH3P22223 829 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 SLC1A2P43004 574 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 RPL21P46778 160 aaKnown RBP10.05□□□□□ -0.8
SDF2-208ENST00000589788 KPNA2P52292 529 aaKnown RBP10.05□□□□□ -0.8
SDF2-208ENST00000589788 HSD11B2P80365 405 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 GUCY2DQ02846 1103 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 HYAL2Q12891 473 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 CALCOCO2Q13137 446 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 HSP90AA5PQ58FG0 334 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 MANEAQ5SRI9 462 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 HP1BP3Q5SSJ5 553 aaPredicted RBP10.05□□□□□ -0.8
SDF2-208ENST00000589788 PLEKHS1Q5SXH7 462 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 TMTC4Q5T4D3 741 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 DUPD1Q68J44 220 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 TTC23LQ6PF05 361 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 UNC5DQ6UXZ4 953 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 DCUN1D3Q8IWE4 304 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 DENND6AQ8IWF6 608 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 CARFQ8N187 725 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 LRRC39Q96DD0 335 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 CFAP36Q96G28 342 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 FOPNLQ96NB1 174 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 OR6C1Q96RD1 312 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 CCNL2Q96S94 520 aaPredicted RBP10.05□□□□□ -0.8
SDF2-208ENST00000589788 DPH5Q9H2P9 285 aa10.05□□□□□ -0.8
SDF2-208ENST00000589788 PPANQ9NQ55 473 aaKnown RBP10.05□□□□□ -0.8
SDF2-208ENST00000589788 FBXO6Q9NRD1 293 aaPredicted RBP10.05□□□□□ -0.8
SDF2-208ENST00000589788 IARS2Q9NSE4 1012 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms