RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 RFX6Q8HWS3 928 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 SIAH3Q8IW03 269 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 KATNAL2Q8IYT4 538 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 LRRC57Q8N9N7 239 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 MNS1Q8NEH6 495 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 LILRB4Q8NHJ6 448 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 PROKR1Q8TCW9 393 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 BRIX1Q8TDN6 353 aaKnown RBP5.85□□□□□ -1.47
VPS25-204ENST00000589577 NSMCE1Q8WV22 266 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 HDAC10Q969S8 669 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 HAUS1Q96CS2 278 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 ZNF670Q9BS34 389 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 TRIM51Q9BSJ1 452 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 TRIM7Q9C029 511 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 SLC7A5P2Q9GIP4 190 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 SPRTNQ9H040 489 aaPredicted RBP5.85□□□□□ -1.47
VPS25-204ENST00000589577 KLHL25Q9H0H3 589 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 CLEC4MQ9H2X3 399 aaPredicted RBP5.85□□□□□ -1.47
VPS25-204ENST00000589577 FAM83DQ9H4H8 585 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 ZNF395Q9H8N7 513 aaPredicted RBP5.85□□□□□ -1.47
VPS25-204ENST00000589577 ZNF160Q9HCG1 818 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 FAM60AQ9NP50 221 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 RASSF1Q9NS23 344 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 PTGFRNQ9P2B2 879 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 RNF14Q9UBS8 474 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 SLC24A2Q9UI40 661 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 SERTAD3Q9UJW9 196 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 TMPRSS11EQ9UL52 423 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 ASB1Q9Y576 335 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 PCDHA3Q9Y5H8 950 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 HRH3Q9Y5N1 445 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 CFAP20Q9Y6A4 193 aaKnown RBP5.85□□□□□ -1.47
VPS25-204ENST00000589577 SAR1BQ9Y6B6 198 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 DNAJC13O75165 2243 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 ZNF487B1APH4 448 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 PGRMC1O00264 195 aaKnown RBP5.84□□□□□ -1.47
VPS25-204ENST00000589577 APOL1O14791 398 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 KLK8O60259 260 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 CEP104O60308 925 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 PMPCBO75439 489 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 URI1O94763 535 aaPredicted RBP5.84□□□□□ -1.47
VPS25-204ENST00000589577 STK10O94804 968 aaKnown RBP5.84□□□□□ -1.47
VPS25-204ENST00000589577 SLC25A14O95258 325 aaPredicted RBP5.84□□□□□ -1.47
VPS25-204ENST00000589577 PRAMEF1O95521 474 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 CELA2AP08217 269 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 CD63P08962 238 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 PRR35P0CG20 571 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 RARAP10276 462 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 MX2P20592 715 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 KDELR1P24390 212 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 SLC25A11Q02978 314 aaKnown RBP5.84□□□□□ -1.47
VPS25-204ENST00000589577 ZIC1Q15915 447 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 PPP2R5EQ16537 467 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 DPYSL2Q16555 572 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 NKG7Q16617 165 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 CA9Q16790 459 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 DEFB110Q30KQ9 67 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 MEI1Q5TIA1 1274 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 KAZNQ674X7 775 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 TMCO3Q6UWJ1 677 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 CHSY3Q70JA7 882 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 RAVER1Q8IY67 606 aaKnown RBP5.84□□□□□ -1.47
VPS25-204ENST00000589577 ZZZ3Q8IYH5 903 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 BBS5Q8N3I7 341 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 C17orf53Q8N3J3 647 aaPredicted RBP5.84□□□□□ -1.47
VPS25-204ENST00000589577 RPRMLQ8N4K4 120 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 CPSF7Q8N684 471 aaKnown RBP5.84□□□□□ -1.47
VPS25-204ENST00000589577 SIRT6Q8N6T7 355 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 GPR26Q8NDV2 337 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 ZFPM2Q8WW38 1151 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 GLYATL1Q969I3 302 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 RNF25Q96BH1 459 aaPredicted RBP5.84□□□□□ -1.47
VPS25-204ENST00000589577 HES6Q96HZ4 224 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 PWWP2AQ96N64 755 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 ZNF599Q96NL3 588 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 LYSMD1Q96S90 227 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 AP1M1Q9BXS5 423 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS25-204ENST00000589577 GOLPH3Q9H4A6 298 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 KIR3DX1Q9H7L2 352 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 HOMER3Q9NSC5 361 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 IMP3Q9NV31 184 aaKnown RBP5.84□□□□□ -1.47
VPS25-204ENST00000589577 COQ3Q9NZJ6 369 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 IL17CQ9P0M4 197 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 CTSFQ9UBX1 484 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 RNF6Q9Y252 685 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 EFR3BQ9Y2G0 817 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 ARID1AO14497 2285 aa5.84□□□□□ -1.47
VPS25-204ENST00000589577 SCN2AQ99250 2005 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 A0A0U1RQJ8 604 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 C1orf232A0A0U1RR37 186 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 NPIPA5E9PKD4 350 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 FAM227AF5H4B4 570 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 H7C1Q1 480 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 CES2O00748 559 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 PPP1R12AO14974 1030 aaPredicted RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 ZSCAN9O15535 394 aaPredicted RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 KCNAB3O43448 404 aa5.83□□□□□ -1.48
VPS25-204ENST00000589577 ZNF500O60304 480 aaPredicted RBP5.83□□□□□ -1.48
VPS25-204ENST00000589577 MAFKO60675 156 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms