RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 ERN1O75460 977 aaKnown RBP13.09□□□□□ -0.31
KDM4B-208ENST00000589104 CREG1O75629 220 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 HMGA1P17096 107 aaKnown RBP13.09□□□□□ -0.31
KDM4B-208ENST00000589104 EIF2DP41214 584 aaKnown RBP13.09□□□□□ -0.31
KDM4B-208ENST00000589104 ZNF846Q147U1 533 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 FAM124AQ86V42 546 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 RNF34Q969K3 372 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 EFHD2Q96C19 240 aaPredicted RBP13.09□□□□□ -0.31
KDM4B-208ENST00000589104 ACPTQ9BZG2 426 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 WDR12Q9GZL7 423 aaKnown RBP13.09□□□□□ -0.31
KDM4B-208ENST00000589104 PCDH12Q9NPG4 1184 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 TRPV5Q9NQA5 729 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 FKBPLQ9UIM3 349 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 SLC27A5Q9Y2P5 690 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 PKP3Q9Y446 797 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 C1orf232A0A0U1RR37 186 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 GLTPD2A6NH11 291 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 CXCR6O00574 342 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 FFAR2O15552 330 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 OTCP00480 354 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 PGRP06401 933 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 DGKQP52824 942 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 IST1P53990 364 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 PTPRNQ16849 979 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 INAVAQ3KP66 663 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 LDLRAP1Q5SW96 308 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 CEP68Q76N32 757 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 NLRP8Q86W28 1048 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 ZZZ3Q8IYH5 903 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 STK40Q8N2I9 435 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 BEND7Q8N7W2 519 aaPredicted RBP13.09□□□□□ -0.31
KDM4B-208ENST00000589104 PDZD8Q8NEN9 1154 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 FBXO22Q8NEZ5 403 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 OR2T12Q8NG77 320 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 PLD4Q96BZ4 506 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 PYURFQ96I23 114 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 CDK15Q96Q40 435 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 PARVBQ9HBI1 364 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 EVLQ9UI08 416 aaPredicted RBP13.09□□□□□ -0.31
KDM4B-208ENST00000589104 PRSS21Q9Y6M0 314 aa13.09□□□□□ -0.31
KDM4B-208ENST00000589104 SLC28A1O00337 649 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 SEC24DO94855 1032 aaPredicted RBP13.08□□□□□ -0.31
KDM4B-208ENST00000589104 C1QCP02747 245 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 ALBP02768 609 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 GSSP48637 474 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 MVDP53602 400 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 HUNKP57058 714 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 MVKQ03426 396 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 TRIM32Q13049 653 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 RAPSNQ13702 412 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 DOC2BQ14184 412 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 GALNT18Q6P9A2 607 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 ADAMTSL2Q86TH1 951 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 RALGPS2Q86X27 583 aaPredicted RBP13.08□□□□□ -0.31
KDM4B-208ENST00000589104 BLOC1S5Q8TDH9 187 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 FRS2Q8WU20 508 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 RNF145Q96MT1 663 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 HERC2P3Q9BVR0 1158 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 KLF16Q9BXK1 252 aaPredicted RBP13.08□□□□□ -0.31
KDM4B-208ENST00000589104 RAD21L1Q9H4I0 556 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 SP140LQ9H930 580 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 ACOT13Q9NPJ3 140 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 MARCH2Q9P0N8 246 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 NDOR1Q9UHB4 597 aa13.08□□□□□ -0.31
KDM4B-208ENST00000589104 RNF103-CHMP3A0A140T963 221 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 FAM47E-STBD1D6RA91 191 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 MANBAO00462 879 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 PRMT5O14744 637 aaPredicted RBP13.08□□□□□ -0.32
KDM4B-208ENST00000589104 VPS26AO75436 327 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 GMNNO75496 209 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 NAT2P11245 290 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 OR1E1P30953 314 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 MC4RP32245 332 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 CERS6Q6ZMG9 384 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 GLT6D1Q7Z4J2 308 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 TAMM41Q96BW9 452 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 CASD1Q96PB1 797 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 SH3GL1Q99961 368 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 SPATA9Q9BWV2 254 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 CCSER2Q9H7U1 834 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 PCDHB5Q9Y5E4 795 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 ELOVL7A1L3X0 281 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 CLDN25C9JDP6 229 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 M0R082 166 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 PSMD11O00231 422 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 KLHL18O94889 574 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 RECKO95980 971 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 CHEK2O96017 543 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 MAD2L1BPQ15013 274 aaPredicted RBP13.08□□□□□ -0.32
KDM4B-208ENST00000589104 ZNF605Q86T29 641 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 TMEM150AQ86TG1 271 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 HIPK1Q86Z02 1210 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 FNDC5Q8NAU1 212 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.08□□□□□ -0.321e-6■■■■■ 28.2
KDM4B-208ENST00000589104 ZFP90Q8TF47 636 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 ECHDC3Q96DC8 303 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 TM9SF3Q9HD45 589 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 TLR8Q9NR97 1041 aaKnown RBP13.08□□□□□ -0.32
KDM4B-208ENST00000589104 AASDHPPTQ9NRN7 309 aa13.08□□□□□ -0.32
KDM4B-208ENST00000589104 CBSLP0DN79 551 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms