RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 OR2B3O76000 313 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 C1orf105O95561 183 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 PKMP14618 531 aaKnown RBP13.93□□□□□ -0.18
DDX39A-208ENST00000588692 CHRM3P20309 590 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 GABRA4P48169 554 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 PTK6Q13882 451 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 ZIC1Q15915 447 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 LONRF1Q17RB8 773 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 RNASEH2BQ5TBB1 312 aaKnown RBP13.93□□□□□ -0.18
DDX39A-208ENST00000588692 PRAMEF17Q5VTA0 474 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 PCGF5Q86SE9 256 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 ZBTB2Q8N680 514 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 C9orf43Q8TAL5 461 aaPredicted RBP13.93□□□□□ -0.18
DDX39A-208ENST00000588692 HMGCLL1Q8TB92 370 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 CALML6Q8TD86 181 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 THAP4Q8WY91 577 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 C17orf62Q9BQA9 187 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 NLNQ9BYT8 704 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 PCYOX1Q9UHG3 505 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 SRPK3Q9UPE1 567 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 CRYL1Q9Y2S2 319 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 MAD1L1Q9Y6D9 718 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 CTAGE9A4FU28 777 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 H3BMH7 237 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 J3QKU1 62 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 ZNF749O43361 778 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 MATN4O95460 622 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 FURINP09958 794 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 MAGP20916 626 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 AGXTP21549 392 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 PMS2P54278 862 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 TTLL9Q3SXZ7 439 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 CNSTQ6PJW8 725 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 PRICKLE2Q7Z3G6 844 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 DNAJC22Q8N4W6 341 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 PROKR1Q8TCW9 393 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 SIGLEC10Q96LC7 697 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 RUNDC3BQ96NL0 473 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 IL17FQ96PD4 163 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 RUFY1Q96T51 708 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 TRIM56Q9BRZ2 755 aaKnown RBP13.92□□□□□ -0.18
DDX39A-208ENST00000588692 DDX47Q9H0S4 455 aaKnown RBP13.92□□□□□ -0.18
DDX39A-208ENST00000588692 SPATA7Q9P0W8 599 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 ASIC3Q9UHC3 531 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 PLCL2Q9UPR0 1127 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 MAN2B2Q9Y2E5 1009 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 NFS1Q9Y697 457 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 COMMD10Q9Y6G5 202 aa13.92□□□□□ -0.18
DDX39A-208ENST00000588692 USP27XA6NNY8 438 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 C9J4A7 227 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 DNALI1O14645 258 aaPredicted RBP13.91□□□□□ -0.18
DDX39A-208ENST00000588692 ZSCAN9O15535 394 aaPredicted RBP13.91□□□□□ -0.18
DDX39A-208ENST00000588692 RFPL1O75677 317 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 PGAM1P18669 254 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 BDKRB1P46663 353 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 RPS18P62269 152 aaKnown RBP13.91□□□□□ -0.18
DDX39A-208ENST00000588692 DEFB110Q30KQ9 67 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 PAPD7Q5XG87 772 aaKnown RBP13.91□□□□□ -0.18
DDX39A-208ENST00000588692 RHBDD2Q6NTF9 364 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 TLDC1Q6P9B6 456 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 FAM198BQ6UWH4 519 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 ATG14Q6ZNE5 492 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 APLFQ8IW19 511 aaPredicted RBP13.91□□□□□ -0.18
DDX39A-208ENST00000588692 AGGF1Q8N302 714 aaeCLIP13.91□□□□□ -0.18
DDX39A-208ENST00000588692 ENDOVQ8N8Q3 282 aaKnown RBP13.91□□□□□ -0.18
DDX39A-208ENST00000588692 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.91□□□□□ -0.18
DDX39A-208ENST00000588692 GABPB2Q8TAK5 448 aaPredicted RBP13.91□□□□□ -0.18
DDX39A-208ENST00000588692 KCNJ9Q92806 393 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 FAM167BQ9BTA0 163 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 NAT9Q9BTE0 207 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 DHRS4Q9BTZ2 278 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 CCDC68Q9H2F9 335 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 FAM114A2Q9NRY5 505 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 C20orf96Q9NUD7 363 aaPredicted RBP13.91□□□□□ -0.18
DDX39A-208ENST00000588692 IL1RAPL1Q9NZN1 696 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.91□□□□□ -0.18
DDX39A-208ENST00000588692 KLHL42Q9P2K6 505 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 CIDEBQ9UHD4 219 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 SNX7Q9UNH6 387 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 PADI2Q9Y2J8 665 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 FAM169AQ9Y6X4 670 aa13.91□□□□□ -0.18
DDX39A-208ENST00000588692 FER1L5A0AVI2 2057 aa13.9□□□□□ -0.18
DDX39A-208ENST00000588692 MKRN2OSH3BPM6 223 aa13.9□□□□□ -0.18
DDX39A-208ENST00000588692 SUV39H1O43463 412 aa13.9□□□□□ -0.18
DDX39A-208ENST00000588692 CD63P08962 238 aa13.9□□□□□ -0.18
DDX39A-208ENST00000588692 SLC1A2P43004 574 aa13.9□□□□□ -0.18
DDX39A-208ENST00000588692 CLCN7P51798 805 aa13.9□□□□□ -0.18
DDX39A-208ENST00000588692 GNG11P61952 73 aa13.9□□□□□ -0.18
DDX39A-208ENST00000588692 IL10RAQ13651 578 aa13.9□□□□□ -0.18
DDX39A-208ENST00000588692 NAA25Q14CX7 972 aa13.9□□□□□ -0.18
DDX39A-208ENST00000588692 NCF4Q15080 339 aa13.9□□□□□ -0.18
DDX39A-208ENST00000588692 SF1Q15637 639 aaKnown RBP13.9□□□□□ -0.18
DDX39A-208ENST00000588692 PTCHD3Q3KNS1 767 aa13.9□□□□□ -0.18
DDX39A-208ENST00000588692 ZC3H12BQ5HYM0 836 aaKnown RBP13.9□□□□□ -0.18
DDX39A-208ENST00000588692 ZNF385CQ66K41 422 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-208ENST00000588692 SYDE1Q6ZW31 735 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-208ENST00000588692 NEK10Q6ZWH5 1172 aa13.9□□□□□ -0.18
DDX39A-208ENST00000588692 TAX1BP1Q86VP1 789 aa13.9□□□□□ -0.18
DDX39A-208ENST00000588692 DENND6AQ8IWF6 608 aa13.9□□□□□ -0.18
DDX39A-208ENST00000588692 LMNTD1Q8N9Z9 388 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms