RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 PRAMEF13Q5VWM6 474 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 IGFL2Q6UWQ7 119 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 NAPRTQ6XQN6 538 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 KCNMB4Q86W47 210 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 MCATQ8IVS2 390 aaKnown RBP13.51□□□□□ -0.25
DNMT1-213ENST00000587604 TC2NQ8N9U0 490 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 PPP4R1Q8TF05 950 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 COG1Q8WTW3 980 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 AGAP4Q96P64 663 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 WDR54Q9H977 334 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 SLC6A20Q9NP91 592 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 FBXL4Q9UKA2 621 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 PLAGL1Q9UM63 463 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 CSMD1Q96PZ7 3565 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 A0A1B0GX78 115 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 F8W8V4 182 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 PSMD3O43242 534 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 MAGP20916 626 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 FOXN2P32314 431 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 RAB28P51157 221 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 HIF1AQ16665 826 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 P3H1Q32P28 736 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 SYTL3Q4VX76 610 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 DNAJC21Q5F1R6 531 aaKnown RBP13.5□□□□□ -0.25
DNMT1-213ENST00000587604 AADACL2Q6P093 401 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 TTLL10Q6ZVT0 673 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 FAM20CQ8IXL6 584 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 SLC34A3Q8N130 599 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 FAM71DQ8N9W8 422 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 DNAJB14Q8TBM8 379 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 SLC22A18Q96BI1 424 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 SLC26A1Q9H2B4 701 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 CDC23Q9UJX2 597 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 NOVA2Q9UNW9 492 aaKnown RBP13.5□□□□□ -0.25
DNMT1-213ENST00000587604 CSAG2Q9Y5P2 127 aa13.5□□□□□ -0.25
DNMT1-213ENST00000587604 CROCCQ5TZA2 2017 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 CCDC162PA2VCL2 907 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 OR51F1A6NGY5 319 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 SOCS6O14544 535 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 ITGAXP20702 1163 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 PTMSP20962 102 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 CD9P21926 228 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 PKLRP30613 574 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 CYLC1P35663 651 aaPredicted RBP13.49□□□□□ -0.25
DNMT1-213ENST00000587604 TSFMP43897 325 aaKnown RBP13.49□□□□□ -0.25
DNMT1-213ENST00000587604 NAP1L1P55209 391 aaKnown RBP13.49□□□□□ -0.25
DNMT1-213ENST00000587604 NKG7Q16617 165 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 ZC3H12BQ5HYM0 836 aaKnown RBP13.49□□□□□ -0.25
DNMT1-213ENST00000587604 IRAK1BP1Q5VVH5 260 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 YOD1Q5VVQ6 348 aaPredicted RBP13.49□□□□□ -0.25
DNMT1-213ENST00000587604 C1QL3Q5VWW1 255 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 KIRREL2Q6UWL6 708 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 LINC00523Q86TU6 105 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 SLC22A15Q8IZD6 547 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 LINC01555Q8NAE3 123 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 ALG3Q92685 438 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 TTC1Q99614 292 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 SPSB2Q99619 263 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 MENTQ9BUN1 341 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 MRM3Q9HC36 420 aaKnown RBP13.49□□□□□ -0.25
DNMT1-213ENST00000587604 ENAMQ9NRM1 1142 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 PIH1D1Q9NWS0 290 aaKnown RBP13.49□□□□□ -0.25
DNMT1-213ENST00000587604 KLHL20Q9Y2M5 609 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 HS3ST3B1Q9Y662 390 aa13.49□□□□□ -0.25
DNMT1-213ENST00000587604 RCCD1A6NED2 376 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 GOLGA6L9A6NEM1 432 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 DSCR3O14972 297 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 LRRTM2O43300 516 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 OR1I1O60431 355 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 S1PR4O95977 384 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 RPN2P04844 631 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 EDN3P14138 238 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 CCR7P32248 378 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 PER3P56645 1201 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 GRM7Q14831 915 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 TLR1Q15399 786 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 CCDC38Q502W7 563 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 TCTE1Q5JU00 501 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 B3GNTL1Q67FW5 361 aaPredicted RBP13.48□□□□□ -0.25
DNMT1-213ENST00000587604 COX15Q7KZN9 410 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 OR13J1Q8NGT2 312 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 GRHL3Q8TE85 626 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 FAR1Q8WVX9 515 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 ASZ1Q8WWH4 475 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 VPS50Q96JG6 964 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 LHPPQ9H008 270 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 SEMA3GQ9NS98 782 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 CUTCQ9NTM9 273 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 INTS7Q9NVH2 962 aaKnown RBP13.48□□□□□ -0.25
DNMT1-213ENST00000587604 IL1RAPL1Q9NZN1 696 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.48□□□□□ -0.25
DNMT1-213ENST00000587604 IMPACTQ9P2X3 320 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 NXT1Q9UKK6 140 aaKnown RBP13.48□□□□□ -0.25
DNMT1-213ENST00000587604 DUSP10Q9Y6W6 482 aa13.48□□□□□ -0.25
DNMT1-213ENST00000587604 BTNL10A8MVZ5 291 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 E2F3O00716 465 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 ALOX12BO75342 701 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 GPC4O75487 556 aa13.47□□□□□ -0.25
DNMT1-213ENST00000587604 GOT2P00505 430 aaKnown RBP13.47□□□□□ -0.25
DNMT1-213ENST00000587604 PTMAP06454 111 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms