RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 ITGADQ13349 1161 aa16.47■□□□□ 0.23
PRKCSH-205ENST00000587327 CTF1Q16619 201 aa16.47■□□□□ 0.23
PRKCSH-205ENST00000587327 LRIF1Q5T3J3 769 aa16.47■□□□□ 0.23
PRKCSH-205ENST00000587327 IGFN1Q86VF2 1251 aa16.47■□□□□ 0.23
PRKCSH-205ENST00000587327 CHPFQ8IZ52 775 aa16.47■□□□□ 0.23
PRKCSH-205ENST00000587327 C10orf111Q8N326 155 aa16.47■□□□□ 0.23
PRKCSH-205ENST00000587327 ZBTB2Q8N680 514 aa16.47■□□□□ 0.23
PRKCSH-205ENST00000587327 FBLIM1Q8WUP2 373 aa16.47■□□□□ 0.23
PRKCSH-205ENST00000587327 OVCA2Q8WZ82 227 aa16.47■□□□□ 0.23
PRKCSH-205ENST00000587327 ULK4Q96C45 1275 aa16.47■□□□□ 0.23
PRKCSH-205ENST00000587327 FAM120BQ96EK7 910 aaKnown RBP16.47■□□□□ 0.23
PRKCSH-205ENST00000587327 PYURFQ96I23 114 aa16.47■□□□□ 0.23
PRKCSH-205ENST00000587327 ZNF347Q96SE7 839 aa16.47■□□□□ 0.23
PRKCSH-205ENST00000587327 IL26Q9NPH9 171 aa16.47■□□□□ 0.23
PRKCSH-205ENST00000587327 SERHLQ9NQF3 203 aa16.47■□□□□ 0.23
PRKCSH-205ENST00000587327 FCF1Q9Y324 198 aaKnown RBP16.47■□□□□ 0.23
PRKCSH-205ENST00000587327 ORC6Q9Y5N6 252 aa16.47■□□□□ 0.23
PRKCSH-205ENST00000587327 COL4A6Q14031 1691 aa16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 UGT2B11O75310 529 aa16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 RECQL5O94762 991 aaPredicted RBP16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 PGLSO95336 258 aa16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 NR4A1P22736 598 aa16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 OR1D2P34982 312 aa16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 CCL23P55773 120 aa16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 CDK5R2Q13319 367 aa16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 ZNF783Q6ZMS7 281 aa16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 NAT16Q8N8M0 369 aa16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 ZBTB8BQ8NAP8 495 aaPredicted RBP16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 WBP2Q969T9 261 aa16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 ZNF566Q969W8 418 aa16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 CPPED1Q9BRF8 314 aaPredicted RBP16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 RNF38Q9H0F5 515 aa16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 KCNH6Q9H252 994 aa16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 TNKS2Q9H2K2 1166 aa16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 TRIT1Q9H3H1 467 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 ZFYVE1Q9HBF4 777 aa16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 DOLKQ9UPQ8 538 aa16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 PCDHGB1Q9Y5G3 927 aa16.46■□□□□ 0.23
PRKCSH-205ENST00000587327 M0QX08 132 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 FKTNO75072 461 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 NDUFS2O75306 463 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 CXCL10P02778 98 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 IRF1P10914 325 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 OPRL1P41146 370 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 CCR3P51677 355 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 EMX1Q04741 257 aaPredicted RBP16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 SFSWAPQ12872 951 aaKnown RBP16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 RNF168Q8IYW5 571 aaPredicted RBP16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 MTFMTQ96DP5 389 aaKnown RBP16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 MYO19Q96H55 970 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 SH3YL1Q96HL8 342 aaPredicted RBP16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 SLC29A3Q9BZD2 475 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 RDH14Q9HBH5 336 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 EXD2Q9NVH0 621 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 SELENONQ9NZV5 590 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 MAN2B2Q9Y2E5 1009 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 DGKBQ9Y6T7 804 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 PLXNA4Q9HCM2 1894 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 A0A096LPI6 279 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 TRBV5-4A0A0C4DH59 114 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 ZNF99A8MXY4 864 aaPredicted RBP16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 BCKDKO14874 412 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 PER2O15055 1255 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 STK16O75716 305 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 ARHGEF15O94989 841 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 SEC24AO95486 1093 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 MYCP01106 439 aaPredicted RBP16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 ITGALP20701 1170 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 ACRV1P26436 265 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 CLDN8P56748 225 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 RPS14P62263 151 aaKnown RBP16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 CPZQ66K79 652 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 CES5AQ6NT32 575 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 NIPAL1Q6NVV3 410 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 HOMEZQ8IX15 550 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 TMEM132CQ8N3T6 1108 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 ACPTQ9BZG2 426 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 CCDC90BQ9GZT6 254 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 PARVBQ9HBI1 364 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 FBXO10Q9UK96 956 aa16.45■□□□□ 0.22
PRKCSH-205ENST00000587327 CLDN9O95484 217 aa16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 KRT6AP02538 564 aa16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 KRT6BP04259 564 aa16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 ITGAMP11215 1152 aa16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 HMGA1P17096 107 aaKnown RBP16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 PTPN6P29350 595 aa16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 IDUAP35475 653 aa16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 MAGEA2P43356 314 aa16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 KRT6CP48668 564 aa16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 TUFMP49411 452 aaKnown RBP16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 CBX3Q13185 183 aa16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 RAPSNQ13702 412 aa16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 ARHGEF7Q14155 803 aa16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 LDLRAP1Q5SW96 308 aa16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 SHQ1Q6PI26 577 aaKnown RBP16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 MACC1Q6ZN28 852 aa16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 MBOAT1Q6ZNC8 495 aa16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 PARP8Q8N3A8 854 aa16.44■□□□□ 0.22
PRKCSH-205ENST00000587327 OR10Q1Q8NGQ4 319 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms