RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 PKMP14618 531 aaKnown RBP17.06■□□□□ 0.32
TPM4-206ENST00000587201 RORAP35398 523 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 IZUMO3Q5VZ72 239 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 ZNF470Q6ECI4 717 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 LCN10Q6JVE6 187 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 CNSTQ6PJW8 725 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 SYVN1Q86TM6 617 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 SYTL1Q8IYJ3 562 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 RAB42Q8N4Z0 105 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 C9orf43Q8TAL5 461 aaPredicted RBP17.06■□□□□ 0.32
TPM4-206ENST00000587201 RAB11FIP5Q9BXF6 653 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 CHRNA10Q9GZZ6 450 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 DDX47Q9H0S4 455 aaKnown RBP17.06■□□□□ 0.32
TPM4-206ENST00000587201 INTS10Q9NVR2 710 aaKnown RBP17.06■□□□□ 0.32
TPM4-206ENST00000587201 IRAK4Q9NWZ3 460 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 ASIC3Q9UHC3 531 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 MAN2B2Q9Y2E5 1009 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 ZCWPW2A0A1B0GU75 182 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 HCRTR1O43613 425 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 USP1O94782 785 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 MAGP20916 626 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 CCNFP41002 786 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 MAGEA3P43357 314 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 GABRA4P48169 554 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 GNG11P61952 73 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 CTBP1Q13363 440 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 UGT8Q16880 541 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 PTCHD3Q3KNS1 767 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 RNASEH2BQ5TBB1 312 aaKnown RBP17.05■□□□□ 0.32
TPM4-206ENST00000587201 PTRH1Q86Y79 214 aaKnown RBP17.05■□□□□ 0.32
TPM4-206ENST00000587201 DENND6AQ8IWF6 608 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 ZBTB2Q8N680 514 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 ENDOVQ8N8Q3 282 aaKnown RBP17.05■□□□□ 0.32
TPM4-206ENST00000587201 MAGEC3Q8TD91 643 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 ABHD17AQ96GS6 310 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 CAPZA3Q96KX2 299 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 SIGLEC10Q96LC7 697 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 SPRTNQ9H040 489 aaPredicted RBP17.05■□□□□ 0.32
TPM4-206ENST00000587201 ZNF71Q9NQZ8 489 aaPredicted RBP17.05■□□□□ 0.32
TPM4-206ENST00000587201 FBXO6Q9NRD1 293 aaPredicted RBP17.05■□□□□ 0.32
TPM4-206ENST00000587201 C20orf96Q9NUD7 363 aaPredicted RBP17.05■□□□□ 0.32
TPM4-206ENST00000587201 SNX7Q9UNH6 387 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 KLHL20Q9Y2M5 609 aa17.05■□□□□ 0.32
TPM4-206ENST00000587201 DNALI1O14645 258 aaPredicted RBP17.04■□□□□ 0.32
TPM4-206ENST00000587201 F7P08709 466 aaPredicted RBP17.04■□□□□ 0.32
TPM4-206ENST00000587201 RAB40ALP0C0E4 278 aa17.04■□□□□ 0.32
TPM4-206ENST00000587201 SPTBP11277 2137 aa17.04■□□□□ 0.32
TPM4-206ENST00000587201 AGXTP21549 392 aa17.04■□□□□ 0.32
TPM4-206ENST00000587201 SF1Q15637 639 aaKnown RBP17.04■□□□□ 0.32
TPM4-206ENST00000587201 LONRF1Q17RB8 773 aa17.04■□□□□ 0.32
TPM4-206ENST00000587201 CCSMST1Q4G0I0 132 aa17.04■□□□□ 0.32
TPM4-206ENST00000587201 AGGF1Q8N302 714 aaeCLIP17.04■□□□□ 0.32
TPM4-206ENST00000587201 DNAJC22Q8N4W6 341 aa17.04■□□□□ 0.32
TPM4-206ENST00000587201 PDLIM2Q96JY6 352 aa17.04■□□□□ 0.32
TPM4-206ENST00000587201 DPH2Q9BQC3 489 aaPredicted RBP17.04■□□□□ 0.32
TPM4-206ENST00000587201 NLNQ9BYT8 704 aa17.04■□□□□ 0.32
TPM4-206ENST00000587201 CCDC68Q9H2F9 335 aa17.04■□□□□ 0.32
TPM4-206ENST00000587201 INTS7Q9NVH2 962 aaKnown RBP17.04■□□□□ 0.32
TPM4-206ENST00000587201 GALPQ9UBC7 116 aa17.04■□□□□ 0.32
TPM4-206ENST00000587201 PLCL2Q9UPR0 1127 aa17.04■□□□□ 0.32
TPM4-206ENST00000587201 AP1M2Q9Y6Q5 423 aa17.04■□□□□ 0.32
TPM4-206ENST00000587201 KRT87PA6NCN2 255 aa17.03■□□□□ 0.32
TPM4-206ENST00000587201 H3BMH7 237 aa17.03■□□□□ 0.32
TPM4-206ENST00000587201 ATP5DP30049 168 aa17.03■□□□□ 0.32
TPM4-206ENST00000587201 SLC1A2P43004 574 aa17.03■□□□□ 0.32
TPM4-206ENST00000587201 IL10RAQ13651 578 aa17.03■□□□□ 0.32
TPM4-206ENST00000587201 PTK6Q13882 451 aa17.03■□□□□ 0.32
TPM4-206ENST00000587201 GBX1Q14549 363 aa17.03■□□□□ 0.32
TPM4-206ENST00000587201 KLHL38Q2WGJ6 581 aa17.03■□□□□ 0.32
TPM4-206ENST00000587201 ACSBG2Q5FVE4 666 aa17.03■□□□□ 0.32
TPM4-206ENST00000587201 FAM198BQ6UWH4 519 aa17.03■□□□□ 0.32
TPM4-206ENST00000587201 PCGF5Q86SE9 256 aa17.03■□□□□ 0.32
TPM4-206ENST00000587201 LMNTD2Q8IXW0 634 aa17.03■□□□□ 0.32
TPM4-206ENST00000587201 ZNF655Q8N720 491 aaPredicted RBP17.03■□□□□ 0.32
TPM4-206ENST00000587201 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.03■□□□□ 0.32
TPM4-206ENST00000587201 CALML6Q8TD86 181 aa17.03■□□□□ 0.32
TPM4-206ENST00000587201 THAP4Q8WY91 577 aa17.03■□□□□ 0.32
TPM4-206ENST00000587201 EURLQ9NYK6 297 aa17.03■□□□□ 0.32
TPM4-206ENST00000587201 TCFL5Q9UL49 500 aa17.03■□□□□ 0.32
TPM4-206ENST00000587201 FAM169AQ9Y6X4 670 aa17.03■□□□□ 0.32
TPM4-206ENST00000587201 C9J4A7 227 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 MKRN2OSH3BPM6 223 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 PYCARD-AS1I3L0S3 204 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 ZSCAN9O15535 394 aaPredicted RBP17.02■□□□□ 0.32
TPM4-206ENST00000587201 SUV39H1O43463 412 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 RFPL1O75677 317 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 MATN4O95460 622 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 CAPN1P07384 714 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 CTSBP07858 339 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 ATXN8OSP0DMR3 200 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 CBSLP0DN79 551 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 CBSP35520 551 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 PMS2P54278 862 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 TTLL9Q3SXZ7 439 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 LACTB2Q53H82 288 aaPredicted RBP17.02■□□□□ 0.32
TPM4-206ENST00000587201 C1orf189Q5VU69 101 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 PAPD7Q5XG87 772 aaKnown RBP17.02■□□□□ 0.32
TPM4-206ENST00000587201 ZNF385CQ66K41 422 aaPredicted RBP17.02■□□□□ 0.32
TPM4-206ENST00000587201 RHBDD2Q6NTF9 364 aa17.02■□□□□ 0.32
TPM4-206ENST00000587201 TLDC1Q6P9B6 456 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms