RNA–Protein interactions for RNA: ENST00000585652.5

AP3D1-203, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 4,433 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-203ENST00000585652 USP39Q53GS9 565 aaKnown RBP12.77□□□□□ -0.37
AP3D1-203ENST00000585652 VN1R5Q7Z5H4 357 aa12.77□□□□□ -0.37
AP3D1-203ENST00000585652 CYP4Z2PQ8N1L4 340 aa12.77□□□□□ -0.37
AP3D1-203ENST00000585652 C12orf76Q8N812 135 aaPredicted RBP12.77□□□□□ -0.37
AP3D1-203ENST00000585652 LEMD2Q8NC56 503 aa12.77□□□□□ -0.37
AP3D1-203ENST00000585652 PIK3C3Q8NEB9 887 aa12.77□□□□□ -0.37
AP3D1-203ENST00000585652 NUAK2Q9H093 628 aa12.77□□□□□ -0.37
AP3D1-203ENST00000585652 MIR1-1HGQ9H1L0 117 aa12.77□□□□□ -0.37
AP3D1-203ENST00000585652 IGSF5Q9NSI5 407 aa12.77□□□□□ -0.37
AP3D1-203ENST00000585652 KLHL3Q9UH77 587 aa12.77□□□□□ -0.37
AP3D1-203ENST00000585652 ZNF232Q9UNY5 417 aa12.77□□□□□ -0.37
AP3D1-203ENST00000585652 SLC9A8Q9Y2E8 581 aa12.77□□□□□ -0.37
AP3D1-203ENST00000585652 MYOCOSA0A1B0GUC4 107 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 ACP5P13686 325 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 ZNF10P21506 573 aaPredicted RBP12.76□□□□□ -0.37
AP3D1-203ENST00000585652 RGRP47804 291 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 EIF2B2P49770 351 aaKnown RBP12.76□□□□□ -0.37
AP3D1-203ENST00000585652 AP1S2P56377 157 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 MED22Q15528 200 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 TNFAIP8L2Q6P589 184 aaPredicted RBP12.76□□□□□ -0.37
AP3D1-203ENST00000585652 BHLHB9Q6PI77 547 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 RGL4Q8IZJ4 473 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 FNDC11Q9BVV2 318 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 CD244Q9BZW8 370 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 KLHL25Q9H0H3 589 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 COQ6Q9Y2Z9 468 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 BACE2Q9Y5Z0 518 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 UBR3Q6ZT12 1888 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 ADAMTSL1Q8N6G6 1762 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 TNFRSF11BO00300 401 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 SMAD6O43541 496 aaKnown RBP12.76□□□□□ -0.37
AP3D1-203ENST00000585652 LDB2O43679 373 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 POP7O75817 140 aaKnown RBP12.76□□□□□ -0.37
AP3D1-203ENST00000585652 OPN1SWP03999 348 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 CD70P32970 193 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 CAPGP40121 348 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 CDH12P55289 794 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 GPM6BQ13491 265 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 AGTRAPQ6RW13 159 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 SUSD1Q6UWL2 747 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 CYP4V2Q6ZWL3 525 aaPredicted RBP12.76□□□□□ -0.37
AP3D1-203ENST00000585652 GALNT13Q8IUC8 556 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 AHI1Q8N157 1196 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 NT5C3BQ969T7 300 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 NUS1Q96E22 293 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 MTERF3Q96E29 417 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 C12orf66Q96MD2 445 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 ZNF607Q96SK3 696 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 ZSCAN5AQ9BUG6 496 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 DGKBQ9Y6T7 804 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 PI15O43692 258 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 RHOP08100 348 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 PRPS1L1P21108 318 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 VIPR1P32241 457 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 GCNT6Q5T4J0 391 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 NANOGP8Q6NSW7 305 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 AHSA2Q719I0 299 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 OR5AK3PQ8NH89 298 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 ZHX1-C8orf76Q96EF9 292 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 KATNBL1Q9H079 304 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 NANOGQ9H9S0 305 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 POPDC3Q9HBV1 291 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 TLR9Q9NR96 1032 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 GTF2A1LQ9UNN4 478 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 ERN1O75460 977 aaKnown RBP12.76□□□□□ -0.37
AP3D1-203ENST00000585652 BMP10O95393 424 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 STATHP02808 62 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 GABRB3P28472 473 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 HNMTP50135 292 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 RPL26P61254 145 aaKnown RBP12.76□□□□□ -0.37
AP3D1-203ENST00000585652 EMX2Q04743 252 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 INAQ16352 499 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 ANKRD26P1Q6NSI1 321 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 TMEM25Q86YD3 366 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 EPHX4Q8IUS5 362 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 HDDC3Q8N4P3 179 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 SLC43A3Q8NBI5 491 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 PHF21AQ96BD5 680 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 BIRC7Q96CA5 298 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 FANCEQ9HB96 536 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 CTPS2Q9NRF8 586 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 FBXW2Q9UKT8 454 aa12.76□□□□□ -0.37
AP3D1-203ENST00000585652 PNMA8CA0A1B0GUJ8 204 aa12.75□□□□□ -0.37
AP3D1-203ENST00000585652 MED26O95402 600 aa12.75□□□□□ -0.37
AP3D1-203ENST00000585652 JUNP05412 331 aaKnown RBP12.75□□□□□ -0.37
AP3D1-203ENST00000585652 ENGP17813 658 aa12.75□□□□□ -0.37
AP3D1-203ENST00000585652 GM2AP17900 193 aa12.75□□□□□ -0.37
AP3D1-203ENST00000585652 NADK2Q4G0N4 442 aa12.75□□□□□ -0.37
AP3D1-203ENST00000585652 XKR4Q5GH76 650 aa12.75□□□□□ -0.37
AP3D1-203ENST00000585652 SPANXN2Q5MJ10 180 aa12.75□□□□□ -0.37
AP3D1-203ENST00000585652 THOC6Q86W42 341 aaKnown RBP12.75□□□□□ -0.37
AP3D1-203ENST00000585652 TMBIM1Q969X1 311 aa12.75□□□□□ -0.37
AP3D1-203ENST00000585652 FUBP1Q96AE4 644 aaKnown RBP12.75□□□□□ -0.37
AP3D1-203ENST00000585652 ZNF382Q96SR6 550 aa12.75□□□□□ -0.37
AP3D1-203ENST00000585652 RNF38Q9H0F5 515 aa12.75□□□□□ -0.37
AP3D1-203ENST00000585652 HMG20AQ9NP66 347 aa12.75□□□□□ -0.37
AP3D1-203ENST00000585652 CLN6Q9NWW5 311 aa12.75□□□□□ -0.37
AP3D1-203ENST00000585652 COL5A3P25940 1745 aaPredicted RBP12.75□□□□□ -0.37
AP3D1-203ENST00000585652 DYRK3O43781 588 aa12.75□□□□□ -0.37
AP3D1-203ENST00000585652 SOCS5O75159 536 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms