RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	CLEC18C	Q8NCF0	446 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	CFAP61	Q8NHU2	1237 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	C9orf43	Q8TAL5	461 aa	Predicted RBP	12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	GSDMB	Q8TAX9	411 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	FAM136A	Q96C01	138 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	TRIM51	Q9BSJ1	452 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	CHRNA10	Q9GZZ6	450 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	FANCE	Q9HB96	536 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	SYTL2	Q9HCH5	934 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	LHX9	Q9NQ69	397 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	GALP	Q9UBC7	116 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	CIDEB	Q9UHD4	219 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	PLAA	Q9Y263	795 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	MRPS18B	Q9Y676	258 aa	Known RBP	12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	NFS1	Q9Y697	457 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	FAM169A	Q9Y6X4	670 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	SEC16A	O15027	2179 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	BLACE	A4D250	179 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	KRT87P	A6NCN2	255 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	TMEM150C	B9EJG8	249 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	RASGRF2	O14827	1237 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	TP73	O15350	636 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	TTI1	O43156	1089 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	SCRG1	O75711	98 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	MATN4	O95460	622 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	C1orf105	O95561	183 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	PRKAR1A	P10644	381 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	CD9	P21926	228 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	BDKRB1	P46663	353 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	GABRA4	P48169	554 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	CLCN7	P51798	805 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	MPP1	Q00013	466 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	GPS2	Q13227	327 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	THOC5	Q13769	683 aa	Known RBP	12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	MORF4L2	Q15014	288 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	SLC5A12	Q1EHB4	618 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	CCSMST1	Q4G0I0	132 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	CRTC2	Q53ET0	693 aa	Predicted RBP	12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	ZNF549	Q6P9A3	640 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	CNST	Q6PJW8	725 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	ZNF517	Q6ZMY9	492 aa	Predicted RBP	12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	TMEM126B	Q8IUX1	230 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	C17orf53	Q8N3J3	647 aa	Predicted RBP	12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	ZBTB2	Q8N680	514 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	LMNTD1	Q8N9Z9	388 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	SLC38A9	Q8NBW4	561 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	OR2L8	Q8NGY9	312 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	OR1L3	Q8NH93	324 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	GIMAP7	Q8NHV1	300 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	CT55	Q8WUE5	264 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	CATSPER2	Q96P56	530 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	IL17F	Q96PD4	163 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	PSMG3-AS1	Q96PY0	264 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	WDR83	Q9BRX9	315 aa	Known RBP	12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	FAM167B	Q9BTA0	163 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	PLAC1	Q9HBJ0	212 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	FAM60A	Q9NP50	221 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	FBXO6	Q9NRD1	293 aa	Predicted RBP	12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	C20orf96	Q9NUD7	363 aa	Predicted RBP	12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	RNF14	Q9UBS8	474 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	PADI1	Q9ULC6	663 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	PCDHB3	Q9Y5E6	796 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	PCDHGA6	Q9Y5G7	932 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760	HEATR5B	Q9P2D3	2071 aa		12.84	□□□□□ -0.35
SREBF1-223	ENST00000584760		H3BMH7	237 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	HCRTR1	O43613	425 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	SEC31A	O94979	1220 aa	Known RBP	12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	TTC4	O95801	387 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	CCNYL3	P0C7X3	344 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	CHRM3	P20309	590 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	OAS2	P29728	719 aa	Known RBP	12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	RORA	P35398	523 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	PAFAH1B1	P43034	410 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	DNASE1L3	Q13609	305 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	DEFB110	Q30KQ9	67 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	HSP90AA5P	Q58FG0	334 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	ACSBG2	Q5FVE4	666 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	PRAMEF17	Q5VTA0	474 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	HIBCH	Q6NVY1	386 aa	Predicted RBP	12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	KCNMB4	Q86W47	210 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	IGDCC3	Q8IVU1	814 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	CALML6	Q8TD86	181 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	SKA2	Q8WVK7	121 aa	Predicted RBP	12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	KCNJ9	Q92806	393 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	RAD51AP1	Q96B01	352 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	TCTN2	Q96GX1	697 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	LRFN5	Q96NI6	719 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	SLC30A3	Q99726	388 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	EBNA1BP2	Q99848	306 aa	Known RBP	12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	NAT9	Q9BTE0	207 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	RAB11FIP5	Q9BXF6	653 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	LRRC4C	Q9HCJ2	640 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	TSR3	Q9UJK0	312 aa	Known RBP	12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	FBXO5	Q9UKT4	447 aa		12.83	□□□□□ -0.36
SREBF1-223	ENST00000584760	ISM1	B1AKI9	464 aa		12.82	□□□□□ -0.36
SREBF1-223	ENST00000584760	C21orf140	B9A014	251 aa		12.82	□□□□□ -0.36
SREBF1-223	ENST00000584760		E5RI56	91 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms