RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 GRK7Q8WTQ7 553 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 ABHD17AQ96GS6 310 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 SLC7A5P2Q9GIP4 190 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 CHRNA10Q9GZZ6 450 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 ZCWPW2A0A1B0GU75 182 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 H3BMH7 237 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 H3BMM5 538 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 RASGRF2O14827 1237 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 SUV39H1O43463 412 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 C1orf105O95561 183 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 CAPN1P07384 714 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 MAGP20916 626 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 BDKRB1P46663 353 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 ADARP55265 1226 aaKnown RBP20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 UGT8Q16880 541 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 ZNF470Q6ECI4 717 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 TTC23LQ6PF05 361 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 CNSTQ6PJW8 725 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 SYVN1Q86TM6 617 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 DNAJC22Q8N4W6 341 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 ENDOVQ8N8Q3 282 aaKnown RBP20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 SLC39A10Q9ULF5 831 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 MAN2B2Q9Y2E5 1009 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 MAD1L1Q9Y6D9 718 aa20.67■□□□□ 0.9
PPP4R1-228ENST00000584074 ZIC2O95409 532 aaPredicted RBP20.66■□□□□ 0.9
PPP4R1-228ENST00000584074 S1PR4O95977 384 aa20.66■□□□□ 0.9
PPP4R1-228ENST00000584074 RAB40ALP0C0E4 278 aa20.66■□□□□ 0.9
PPP4R1-228ENST00000584074 PKMP14618 531 aaKnown RBP20.66■□□□□ 0.9
PPP4R1-228ENST00000584074 CHRM3P20309 590 aa20.66■□□□□ 0.9
PPP4R1-228ENST00000584074 GBX1Q14549 363 aa20.66■□□□□ 0.9
PPP4R1-228ENST00000584074 PPP1R7Q15435 360 aa20.66■□□□□ 0.9
PPP4R1-228ENST00000584074 FAM198BQ6UWH4 519 aa20.66■□□□□ 0.9
PPP4R1-228ENST00000584074 DENND6AQ8IWF6 608 aa20.66■□□□□ 0.9
PPP4R1-228ENST00000584074 PPIL6Q8IXY8 311 aa20.66■□□□□ 0.9
PPP4R1-228ENST00000584074 SEC14L1Q92503 715 aa20.66■□□□□ 0.9
PPP4R1-228ENST00000584074 RAD51AP1Q96B01 352 aa20.66■□□□□ 0.9
PPP4R1-228ENST00000584074 SIGLEC10Q96LC7 697 aa20.66■□□□□ 0.9
PPP4R1-228ENST00000584074 NLNQ9BYT8 704 aa20.66■□□□□ 0.9
PPP4R1-228ENST00000584074 DDX47Q9H0S4 455 aaKnown RBP20.66■□□□□ 0.9
PPP4R1-228ENST00000584074 INTS10Q9NVR2 710 aaKnown RBP20.66■□□□□ 0.9
PPP4R1-228ENST00000584074 CTAGE9A4FU28 777 aa20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 HBQ1P09105 142 aa20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 PMS2P54278 862 aa20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 CTBP1Q13363 440 aa20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 THOC5Q13769 683 aaKnown RBP20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 SF1Q15637 639 aaKnown RBP20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 ACSBG2Q5FVE4 666 aa20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 RNASEH2BQ5TBB1 312 aaKnown RBP20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 ZNF385CQ66K41 422 aaPredicted RBP20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 SPNS2Q8IVW8 549 aa20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 ZBTB2Q8N680 514 aa20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 SLC22A18Q96BI1 424 aa20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 FOPNLQ96NB1 174 aa20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 TRIM4Q9C037 500 aa20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 FBXO6Q9NRD1 293 aaPredicted RBP20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 TCFL5Q9UL49 500 aa20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 PLCL2Q9UPR0 1127 aa20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 VPS9D1Q9Y2B5 631 aa20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 AP1M2Q9Y6Q5 423 aa20.65■□□□□ 0.9
PPP4R1-228ENST00000584074 K7EM74 188 aa20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 MATN4O95460 622 aa20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 CBSLP0DN79 551 aa20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 TCP1P17987 556 aaKnown RBP20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 CBSP35520 551 aa20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 C1orf189Q5VU69 101 aa20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 ATG14Q6ZNE5 492 aa20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 ZNF655Q8N720 491 aaPredicted RBP20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 DENND1AQ8TEH3 1009 aa20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 SLC30A3Q99726 388 aa20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 DPH2Q9BQC3 489 aaPredicted RBP20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 RAB11FIP5Q9BXF6 653 aa20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 C20orf96Q9NUD7 363 aaPredicted RBP20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 IRAK4Q9NWZ3 460 aa20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 EURLQ9NYK6 297 aa20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 ASIC3Q9UHC3 531 aa20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 TLK1Q9UKI8 766 aa20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 SNX7Q9UNH6 387 aa20.64■□□□□ 0.89
PPP4R1-228ENST00000584074 E5RI56 91 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 ZSCAN9O15535 394 aaPredicted RBP20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 PRICKLE3O43900 615 aaPredicted RBP20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 RFPL1O75677 317 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 DNAJB5O75953 348 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 USP1O94782 785 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 ATXN8OSP0DMR3 200 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 AGXTP21549 392 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 ATP5DP30049 168 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 CCNFP41002 786 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 GRIA3P42263 894 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 SLC1A2P43004 574 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 NCF4Q15080 339 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 LONRF1Q17RB8 773 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 LACTB2Q53H82 288 aaPredicted RBP20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 CPZQ66K79 652 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 FCRL6Q6DN72 434 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 RHBDD2Q6NTF9 364 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 ZNF549Q6P9A3 640 aa20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 MCATQ8IVS2 390 aaKnown RBP20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 APLFQ8IW19 511 aaPredicted RBP20.63■□□□□ 0.89
PPP4R1-228ENST00000584074 THAP4Q8WY91 577 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms