RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ISCA2Q86U28 154 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 RTN4RL2Q86UN3 420 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 THNSL1Q8IYQ7 743 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 MAML2Q8IZL2 1156 aaPredicted RBP5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 EID3Q8N140 333 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 MAPKAPK5-AS1Q8N8E1 139 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 EXT2Q93063 718 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 SENP5Q96HI0 755 aaPredicted RBP5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 RAB3IPQ96QF0 476 aaPredicted RBP5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 RAD9AQ99638 391 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 KATNB1Q9BVA0 655 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 LAT2Q9GZY6 243 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 FZD8Q9H461 694 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 CDH20Q9HBT6 801 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 CHCHD3Q9NX63 227 aaKnown RBP5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 KIAA1210Q9ULL0 1709 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 LOC101059948A0A1B0GTJ6 334 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 SMIM1B2RUZ4 78 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 PRKRAO75569 313 aaKnown RBP5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 NGFP01138 241 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 INHBAP08476 426 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 FRMD6-AS1P0C7T7 363 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 PTGER4P35408 488 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 UBASH3AP57075 661 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 TFCP2Q12800 502 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 UGT3A2Q3SY77 523 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 TRAT1Q6PIZ9 186 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 CUZD1Q86UP6 607 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 OR10V1Q8NGI7 309 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 ZNF524Q96C55 264 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 SPATA17Q96L03 361 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 LRRC3BQ96PB8 259 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 MIS12Q9H081 205 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 SDR39U1Q9NRG7 319 aaPredicted RBP5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 POLLQ9UGP5 575 aa5.11□□□□□ -1.59
SMARCE1-219ENST00000583294 ARHGEF37A1IGU5 675 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 CSN3P07498 182 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 SAGP10523 405 aaPredicted RBP5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 PDGFRAP16234 1089 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 CEACAM8P31997 349 aaPredicted RBP5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 TIMP3P35625 211 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 PRKCIP41743 596 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 TAF10Q12962 218 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 ITGA7Q13683 1181 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 ODF4Q2M2E3 257 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 CAVIN1Q6NZI2 390 aaKnown RBP5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 GALNTL5Q7Z4T8 443 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 DNAJB7Q7Z6W7 309 aaPredicted RBP5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 FAM219AQ8IW50 185 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 VANGL1Q8TAA9 524 aaPredicted RBP5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 SETD6Q8TBK2 473 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 PIGBQ92521 554 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 FAM20AQ96MK3 541 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 FNBP1Q96RU3 617 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 MGME1Q9BQP7 344 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 SLC2A11Q9BYW1 496 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 PRRG4Q9BZD6 226 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 EDEM3Q9BZQ6 932 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 MRGBPQ9NV56 204 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 ADPRHL2Q9NX46 363 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 TCF20Q9UGU0 1960 aaKnown RBP5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 WDR83OSQ9Y284 106 aa5.1□□□□□ -1.59
SMARCE1-219ENST00000583294 A0A1W2PN81 502 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 ERVV-2B6SEH9 535 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 ZNF197O14709 1029 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 GLULP15104 373 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 EFNA1P20827 205 aaPredicted RBP5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 CHRNA7P36544 502 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 CRKLP46109 303 aaKnown RBP5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 CYP4A22Q5TCH4 519 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 MFSD6Q6ZSS7 791 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 NUDT13Q86X67 352 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 MMD2Q8IY49 270 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 LGI2Q8N0V4 545 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 BMPERQ8N8U9 685 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 PHLDA1Q8WV24 401 aaPredicted RBP5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 RMDN2Q96LZ7 410 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 SPAG5Q96R06 1193 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 GTPBP2Q9BX10 602 aaKnown RBP5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 XAB2Q9HCS7 855 aaKnown RBP5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 DNAJC4Q9NNZ3 241 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 SIX2Q9NPC8 291 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 SLC52A3Q9NQ40 469 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 SH3GLB2Q9NR46 395 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 SPHK1Q9NYA1 384 aa5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 ZNF624Q9P2J8 865 aaPredicted RBP5.09□□□□□ -1.59
SMARCE1-219ENST00000583294 CNTNAP2Q9UHC6 1331 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 A0A1W2PPK0 400 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 ENO4A6NNW6 628 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 PMS2P5A8MQ11 134 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 ATP6V0E1O15342 81 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 GSRP00390 522 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 SCG2P13521 617 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 IRF2P14316 349 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 IFNAR1P17181 557 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 CDH3P22223 829 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 CDC25CP30307 473 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 GP5P40197 560 aa5.08□□□□□ -1.6
SMARCE1-219ENST00000583294 CAPZA1P52907 286 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms