RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 PROCP04070 461 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 GP1BAP07359 652 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 RBP1P09455 135 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 JUPP14923 745 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 CPA3P15088 417 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 PNLIPP16233 465 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 ITGB6P18564 788 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 SAT1P21673 171 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 BGNP21810 368 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 RPL10P27635 214 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 AOAHP28039 575 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 NDUFS1P28331 727 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 ACADVLP49748 655 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 HK2P52789 917 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 HNRNPH2P55795 449 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 MAZP56270 477 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 CHI3L2Q15782 390 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 ZNF789Q5FWF6 425 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 EFL1Q7Z2Z2 1120 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 CMC1Q7Z7K0 106 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 CLEC14AQ86T13 490 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 ZNF605Q86T29 641 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 ARL14Q8N4G2 192 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 WWP1Q9H0M0 922 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 SYTL2Q9HCH5 934 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 THAP1Q9NVV9 213 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 TAS2R13Q9NYV9 303 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 COPG2Q9UBF2 871 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 CPNE7Q9UBL6 633 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 LY6G6EA0A0G2JKS1 128 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 CPED1A4D0V7 1026 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 IQCF5A8MTL0 148 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 RFPL3O75679 317 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 KLHL2O95198 593 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 EML2O95834 649 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 RPN2P04844 631 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 LTA4HP09960 611 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 MTHFD1P11586 935 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 XRCC1P18887 633 aaPredicted RBP13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 CD9P21926 228 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 CCR7P32248 378 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 SERPINB5P36952 375 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 SKIV2L2P42285 1042 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 GPR3P46089 330 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 PREPP48147 710 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 NAA20P61599 178 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 UBE2IP63279 158 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 E2F1Q01094 437 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 HHEXQ03014 270 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 HSPA14Q0VDF9 509 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 IFT88Q13099 833 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 PDAP1Q13442 181 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 RPE65Q16518 533 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 HECTD2Q5U5R9 776 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 LRRC8EQ6NSJ5 796 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 GUSBP11Q6P575 273 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 ZNF549Q6P9A3 640 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 ZNF438Q7Z4V0 828 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 WDR75Q8IWA0 830 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 SLC22A15Q8IZD6 547 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 AFAP1L2Q8N4X5 818 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 ZBTB2Q8N680 514 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 WDR48Q8TAF3 677 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 IFI44Q8TCB0 444 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 LKAAEAR1Q8TD35 194 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 PATE1Q8WXA2 126 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 NXPE2Q96DL1 559 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 RMDN2Q96LZ7 410 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 C12orf66Q96MD2 445 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 MRPL57Q9BQC6 102 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 OR52A5Q9H2C5 316 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 MRPL46Q9H2W6 279 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 GPAMQ9HCL2 828 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 LATS2Q9NRM7 1088 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 IMP3Q9NV31 184 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 LRIT1Q9P2V4 623 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 TRMT6Q9UJA5 497 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 PSMD13Q9UNM6 376 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 VWA7Q9Y334 891 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 AK5Q9Y6K8 562 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 COLEC10Q9Y6Z7 277 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 U3KQA8 63 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 RP1P56715 2156 aa13.13□□□□□ -0.31
CSNK1D-220ENST00000581737 OR52A4PA6NMU1 304 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 EIF3FO00303 357 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 KDM1AO60341 852 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 GPC4O75487 556 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 SLCO2B1O94956 709 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 CBSLP0DN79 551 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 ENO3P13929 434 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 GABRB3P28472 473 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 CBSP35520 551 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 MAPK9P45984 424 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 RGS4P49798 205 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 KRT33BQ14525 404 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 HES3Q5TGS1 186 aa13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 CAPRIN2Q6IMN6 1127 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-220ENST00000581737 CDHR3Q6ZTQ4 885 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms