RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 OR52E1Q8NGJ3 308 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 OR56A3Q8NH54 315 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 HMGCLL1Q8TB92 370 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 SH3KBP1Q96B97 665 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.42□□□□□ -0.74
SS18-213ENST00000579640 DRC3Q9H069 523 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 SLC32A1Q9H598 525 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 UCK1Q9HA47 277 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 THAP1Q9NVV9 213 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 OPTCQ9UBM4 332 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 ADAM21Q9UKJ8 722 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 STK38LQ9Y2H1 464 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 TRBV23OR9-2A0A075B6M9 112 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 FAM221BA6H8Z2 402 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 K7EPI3 171 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 PCDHGA12O60330 932 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 LRP3O75074 770 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 SIX3O95343 332 aaPredicted RBP10.42□□□□□ -0.74
SS18-213ENST00000579640 ZNF806P0C7X5 589 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 NBL1P41271 181 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 AGTR2P50052 363 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 HHEXQ03014 270 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 BST1Q10588 318 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 RCN2Q14257 317 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 PTCHD3Q3KNS1 767 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 C14orf28Q4W4Y0 310 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 CAPN13Q6MZZ7 669 aaPredicted RBP10.42□□□□□ -0.74
SS18-213ENST00000579640 ZCCHC23Q6ZST2 131 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 FRMD7Q6ZUT3 714 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 KIRREL3Q8IZU9 778 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 ARL14Q8N4G2 192 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 ARL10Q8N8L6 244 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 GPR156Q8NFN8 814 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 OR2L8Q8NGY9 312 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 ZNF483Q8TF39 744 aaPredicted RBP10.42□□□□□ -0.74
SS18-213ENST00000579640 LCN9Q8WX39 176 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 SMPDL3AQ92484 453 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 MENTQ9BUN1 341 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 PCBD2Q9H0N5 130 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 EML4Q9HC35 981 aaKnown RBP10.42□□□□□ -0.74
SS18-213ENST00000579640 FSCN3Q9NQT6 498 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 OR6C2Q9NZP2 312 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 PCTPQ9UKL6 214 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 PCDHGB2Q9Y5G2 931 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 CACNA1HO95180 2353 aa10.42□□□□□ -0.74
SS18-213ENST00000579640 SRRM3A6NNA2 597 aaPredicted RBP10.41□□□□□ -0.74
SS18-213ENST00000579640 E7ENX8 843 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 E2F3O00716 465 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 CCNT2O60583 730 aaKnown RBP10.41□□□□□ -0.74
SS18-213ENST00000579640 SNNO75324 88 aaPredicted RBP10.41□□□□□ -0.74
SS18-213ENST00000579640 KATNA1O75449 491 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 MLYCDO95822 493 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 GIMD1P0DJR0 217 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 EPB42P16452 691 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 SLC1A6P48664 564 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 ABCE1P61221 599 aaKnown RBP10.41□□□□□ -0.74
SS18-213ENST00000579640 GNGT1P63211 74 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 TAP2Q03519 686 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 CLCQ05315 142 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 BIRC2Q13490 618 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 NAE1Q13564 534 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 GTF2H2Q13888 395 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 SUZ12Q15022 739 aaKnown RBP10.41□□□□□ -0.74
SS18-213ENST00000579640 PLCL1Q15111 1095 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.41□□□□□ -0.74
SS18-213ENST00000579640 TTC19Q6DKK2 380 aaPredicted RBP10.41□□□□□ -0.74
SS18-213ENST00000579640 ZCCHC8Q6NZY4 707 aaKnown RBP10.41□□□□□ -0.74
SS18-213ENST00000579640 GTF2H2CQ6P1K8 395 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 TMEM26Q6ZUK4 368 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 HOMEZQ8IX15 550 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 LRRC56Q8IYG6 542 aaPredicted RBP10.41□□□□□ -0.74
SS18-213ENST00000579640 MINDY1Q8N5J2 469 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 OR4C6Q8NH72 309 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 SETD7Q8WTS6 366 aaKnown RBP10.41□□□□□ -0.74
SS18-213ENST00000579640 PATE1Q8WXA2 126 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 MIPEPQ99797 713 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 GTPBP2Q9BX10 602 aaKnown RBP10.41□□□□□ -0.74
SS18-213ENST00000579640 SGPP1Q9BX95 441 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 ATG10Q9H0Y0 220 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 GSTO2Q9H4Y5 243 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 IL21RQ9HBE5 538 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 CCDC177Q9NQR7 707 aaPredicted RBP10.41□□□□□ -0.74
SS18-213ENST00000579640 DNAJC11Q9NVH1 559 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 PLAGL1Q9UM63 463 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 ICKQ9UPZ9 632 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 ANGPTL3Q9Y5C1 460 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 ADAMTS9Q9P2N4 1935 aa10.41□□□□□ -0.74
SS18-213ENST00000579640 KRT87PA6NCN2 255 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 LILRA5A6NI73 299 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 TCP11X1B4DZS4 312 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 WDR47O94967 919 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 HSPA4LO95757 839 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 LMNAP02545 664 aaKnown RBP10.4□□□□□ -0.74
SS18-213ENST00000579640 LSP1P33241 339 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 TBPL1P62380 186 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 LCP2Q13094 533 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 GPR18Q14330 331 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 CCDC6Q16204 474 aa10.4□□□□□ -0.74
SS18-213ENST00000579640 ZXDCQ2QGD7 858 aaPredicted RBP10.4□□□□□ -0.74
SS18-213ENST00000579640 C18orf21Q32NC0 220 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms