RNA–Protein interactions for RNA: ENST00000579531.5

MSI2-211, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-211	ENST00000579531	MAGED1	Q9Y5V3	778 aa	Predicted RBP	3.98	□□□□□ -1.77
MSI2-211	ENST00000579531	PSAT1	Q9Y617	370 aa		3.98	□□□□□ -1.77
MSI2-211	ENST00000579531	TRANK1	O15050	2925 aa		3.98	□□□□□ -1.77
MSI2-211	ENST00000579531	HELZ	P42694	1942 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	PLXNA3	P51805	1871 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	DENND4A	Q7Z401	1863 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	NUP210	Q8TEM1	1887 aa	Predicted RBP	3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	C2orf16	Q68DN1	1984 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	SYNJ2BP-COX16	A0A087WUM0	186 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531		A0A0A0MQY5	61 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	MYMK	A6NI61	221 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	PP2D1	A8MPX8	630 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	PDXK	O00764	312 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	MCF2L	O15068	1137 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	AHCYL1	O43865	530 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	PAGE4	O60829	102 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	PTP4A3	O75365	173 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	TOM1L1	O75674	476 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	ERLIN2	O94905	339 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	BAG2	O95816	211 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	FGB	P02675	491 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	EIF2S1	P05198	315 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	VIM	P08670	466 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	STAG3L1	P0CL83	205 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	MCF2	P10911	925 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	MYF6	P23409	242 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	CHAT	P28329	748 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	MPG	P29372	298 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	TTK	P33981	857 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	CTNNA1	P35221	906 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	GCK	P35557	465 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	ARHGAP25	P42331	645 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	MMP13	P45452	471 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	FNTA	P49354	379 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	NDUFA8	P51970	172 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	BLVRA	P53004	296 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	GAD2	Q05329	585 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	MBTD1	Q05BQ5	628 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	LRRC63	Q05C16	580 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	NIPAL4	Q0D2K0	466 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	CSTF3	Q12996	717 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	CAPS	Q13938	189 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	DPYS	Q14117	519 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	LPIN1	Q14693	890 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	GPNMB	Q14956	572 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	INPP5J	Q15735	1006 aa	Predicted RBP	3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	MEA1	Q16626	185 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	TCTN1	Q2MV58	587 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	KLHL40	Q2TBA0	621 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	SLC45A4	Q5BKX6	768 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	ZNF658	Q5TYW1	1059 aa	Predicted RBP	3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	PLA2G4F	Q68DD2	849 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	FAM109B	Q6ICB4	259 aa	Predicted RBP	3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	HMBOX1	Q6NT76	420 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	PLBD1	Q6P4A8	553 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	SLC27A1	Q6PCB7	646 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	MOB3C	Q70IA8	216 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	HAUS6	Q7Z4H7	955 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	NANOGNB	Q7Z5D8	188 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	GPBP1	Q86WP2	473 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	TICAM1	Q8IUC6	712 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	ARHGAP12	Q8IWW6	846 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	TDH	Q8IZJ6	230 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	RBFA	Q8N0V3	343 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	DAW1	Q8N136	415 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	GUF1	Q8N442	669 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	FRMD1	Q8N878	549 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	LRRC57	Q8N9N7	239 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	KDM1B	Q8NB78	822 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	SPC24	Q8NBT2	197 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	TMEM161B	Q8NDZ6	487 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	OR8H1	Q8NGG4	311 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	C16orf52	Q8NHV5	167 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	SLC35F5	Q8WV83	523 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	ATOH1	Q92858	354 aa	Predicted RBP	3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	TOP1MT	Q969P6	601 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	PPP1R14B	Q96C90	147 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	FIZ1	Q96SL8	496 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	ADPGK	Q9BRR6	497 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	POLR3F	Q9H1D9	316 aa	Predicted RBP	3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	KLHL31	Q9H511	634 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	SLITRK6	Q9H5Y7	841 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	FBRSL1	Q9HCM7	1045 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	WDR6	Q9NNW5	1121 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	SMYD2	Q9NRG4	433 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	RGS18	Q9NS28	235 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	PANK4	Q9NVE7	773 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	ARGLU1	Q9NWB6	273 aa	Predicted RBP	3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	TMEM161A	Q9NX61	479 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	VPS28	Q9UK41	221 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	PADI3	Q9ULW8	664 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	GPR34	Q9UPC5	381 aa		3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	AAR2	Q9Y312	384 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-211	ENST00000579531	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-211	ENST00000579531		A0A1B0GVL5	298 aa		3.96	□□□□□ -1.78
MSI2-211	ENST00000579531	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-211	ENST00000579531	EME2	A4GXA9	379 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-211	ENST00000579531	GOLGA6L9	A6NEM1	432 aa		3.96	□□□□□ -1.78
MSI2-211	ENST00000579531	KCNU1	A8MYU2	1149 aa		3.96	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms