RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ASB12Q8WXK4 309 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 DNASE1L2Q92874 299 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 LRRC58Q96CX6 371 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 CHFRQ96EP1 664 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 COX14Q96I36 57 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 FRG2BQ96QU4 278 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 HAUS8Q9BT25 410 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 EFCAB11Q9BUY7 163 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 C1orf50Q9BV19 199 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 PCBD2Q9H0N5 130 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 ZNF576Q9H609 170 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 BRF2Q9HAW0 419 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 PREBQ9HCU5 417 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 CLEC1BQ9P126 229 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 STOX2Q9P2F5 926 aaPredicted RBP10.83□□□□□ -0.68
SKA2-204ENST00000578519 ATXN10Q9UBB4 475 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 ADGRE2Q9UHX3 823 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 SLC22A14Q9Y267 594 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 ASB1Q9Y576 335 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 PTGDR2Q9Y5Y4 395 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 SCN8AQ9UQD0 1980 aa10.83□□□□□ -0.68
SKA2-204ENST00000578519 MYOFQ9NZM1 2061 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 TMEM265A0A087WTH1 108 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 IGLON5A6NGN9 336 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 AQP12BA6NM10 295 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 ARHGEF33A8MVX0 844 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 ANHXE9PGG2 379 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 H0YIV9 168 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 SPINT1O43278 529 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 PEX1O43933 1283 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 RNASEH2AO75792 299 aaKnown RBP10.82□□□□□ -0.68
SKA2-204ENST00000578519 KCNH1O95259 989 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 PCCBP05166 539 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 ACADMP11310 421 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 DDX5P17844 614 aaKnown RBP10.82□□□□□ -0.68
SKA2-204ENST00000578519 ATP6V1C1P21283 382 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 IL10P22301 178 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 CXCR2P25025 360 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 VARSP26640 1264 aaKnown RBP10.82□□□□□ -0.68
SKA2-204ENST00000578519 HTR6P50406 440 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 SLC7A2P52569 658 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 PFN3P60673 137 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 UFM1P61960 85 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 RPS14P62263 151 aaKnown RBP10.82□□□□□ -0.68
SKA2-204ENST00000578519 LRRC74AQ0VAA2 488 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 PWP1Q13610 501 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 CEACAM7Q14002 265 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 ARHGAP19Q14CB8 494 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 EOGTQ5NDL2 527 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 ZNF648Q5T619 568 aaPredicted RBP10.82□□□□□ -0.68
SKA2-204ENST00000578519 IER5LQ5T953 404 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 C8orf82Q6P1X6 216 aaPredicted RBP10.82□□□□□ -0.68
SKA2-204ENST00000578519 LAYNQ6UX15 382 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 HID1Q8IV36 788 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 AQP12AQ8IXF9 295 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 SYTL1Q8IYJ3 562 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 RGL4Q8IZJ4 473 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 HIPK4Q8NE63 616 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 BHLHE22Q8NFJ8 381 aaPredicted RBP10.82□□□□□ -0.68
SKA2-204ENST00000578519 OR9I1Q8NGQ6 314 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 OR2T11Q8NH01 316 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 HMGCLL1Q8TB92 370 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 FGF14Q92915 247 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 MED8Q96G25 268 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 NAF1Q96HR8 494 aaKnown RBP10.82□□□□□ -0.68
SKA2-204ENST00000578519 ABHD8Q96I13 439 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 PKP4Q99569 1192 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 PRPF18Q99633 342 aaKnown RBP10.82□□□□□ -0.68
SKA2-204ENST00000578519 GABRG3Q99928 467 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 GPATCH1Q9BRR8 931 aaKnown RBP10.82□□□□□ -0.68
SKA2-204ENST00000578519 KLHL4Q9C0H6 718 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 ATG10Q9H0Y0 220 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 EHD1Q9H4M9 534 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 Q9H521 79 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 WDR26Q9H7D7 661 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 BATF3Q9NR55 127 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 FBXL12Q9NXK8 326 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 FAM8A1Q9UBU6 413 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 CD300AQ9UGN4 299 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 ZNHIT2Q9UHR6 403 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 CD207Q9UJ71 328 aa10.82□□□□□ -0.68
SKA2-204ENST00000578519 RUVBL1Q9Y265 456 aaKnown RBP10.82□□□□□ -0.68
SKA2-204ENST00000578519 POLR3HQ9Y535 204 aaPredicted RBP10.82□□□□□ -0.68
SKA2-204ENST00000578519 A0A1B0GTL3 188 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 CACNB4O00305 520 aaPredicted RBP10.81□□□□□ -0.68
SKA2-204ENST00000578519 PDYNP01213 254 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 UMPSP11172 480 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 G6PDP11413 515 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 BMP1P13497 986 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 ZNF8P17098 575 aaPredicted RBP10.81□□□□□ -0.68
SKA2-204ENST00000578519 XRCC1P18887 633 aaPredicted RBP10.81□□□□□ -0.68
SKA2-204ENST00000578519 CAPN3P20807 821 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 ITPKAP23677 461 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 S100A3P33764 101 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 RPL3P39023 403 aaKnown RBP10.81□□□□□ -0.68
SKA2-204ENST00000578519 WASP42768 502 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 KIR2DL1P43626 348 aaPredicted RBP10.81□□□□□ -0.68
SKA2-204ENST00000578519 ASMTP46597 345 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 PREPP48147 710 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 HSPA13P48723 471 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms