RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	ZNF549	Q6P9A3	640 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CES3	Q6UWW8	571 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SHISA6	Q6ZSJ9	500 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CENPU	Q71F23	418 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	BZW1	Q7L1Q6	419 aa	Known RBP	4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	LAPTM4B	Q86VI4	370 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SLC13A5	Q86YT5	568 aa	Predicted RBP	4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MPP5	Q8N3R9	675 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CISD2	Q8N5K1	135 aa	Known RBP	4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZNF655	Q8N720	491 aa	Predicted RBP	4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	AMER3	Q8N944	861 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TEX19	Q8NA77	164 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CATSPER1	Q8NEC5	780 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OR2Y1	Q8NGV0	311 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OR5K2	Q8NHB8	316 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	STYX	Q8WUJ0	223 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CPT1B	Q92523	772 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	DLG3	Q92796	817 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ULK4	Q96C45	1275 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CCDC138	Q96M89	665 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TTC25	Q96NG3	672 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TAAR6	Q96RI8	345 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	WDR83	Q9BRX9	315 aa	Known RBP	4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TRIM5	Q9C035	493 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZCCHC2	Q9C0B9	1178 aa	Known RBP	4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SLC26A1	Q9H2B4	701 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SOHLH2	Q9NX45	425 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	P4HTM	Q9NXG6	502 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	EURL	Q9NYK6	297 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SMARCAL1	Q9NZC9	954 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	IL1RAPL1	Q9NZN1	696 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	IMPACT	Q9P2X3	320 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	RIMKLB	Q9ULI2	386 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SNX7	Q9UNH6	387 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SH2B3	Q9UQQ2	575 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TCAF1	Q9Y4C2	921 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CELSR1	Q9NYQ6	3014 aa		4.27	□□□□□ -1.73
PPP4R1-209	ENST00000578329	IGLV3-12	A0A075B6K2	115 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329		A0A0J9YY10	115 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	LOC100996750	A0A140TA64	210 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329		A0A1W2PQ72	361 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OR2A25	A4D2G3	310 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KLHL33	A6NCF5	533 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OR2W5	A6NFC9	320 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TTLL8	A6PVC2	850 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ARHGEF33	A8MVX0	844 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	C2orf74	A8MZ97	194 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	GOLGA8K	D6RF30	607 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329		E7EQ34	232 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	GOLGA8T	H3BQL2	631 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TP73	O15350	636 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZSCAN9	O15535	394 aa	Predicted RBP	4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	P2RX6	O15547	441 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FOXS1	O43638	330 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MAN1A2	O60476	641 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	NIPSNAP2	O75323	286 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	AVIL	O75366	819 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OR2B3	O76000	313 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TJP3	O95049	919 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MATN4	O95460	622 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	C1orf105	O95561	183 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ATXN8OS	P0DMR3	200 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CYP2A7	P20853	494 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CD9	P21926	228 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	NDUFS1	P28331	727 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OTX2	P32243	289 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SOX11	P35716	441 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	DCT	P40126	519 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	HADHA	P40939	763 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	NSG1	P42857	185 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	BDKRB1	P46663	353 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OR1D4	P47884	311 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KCNJ1	P48048	391 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CARS	P49589	748 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TDGF1P3	P51864	188 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	GSDMD	P57764	484 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	RPS15	P62841	145 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SNX1	Q13596	522 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SEPT6	Q14141	434 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SSPN	Q14714	243 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MYBPC3	Q14896	1274 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	NR6A1	Q15406	480 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	P3H1	Q32P28	736 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MEI1	Q5TIA1	1274 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ATG9B	Q674R7	924 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZNF425	Q6IV72	752 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KLHL35	Q6PF15	583 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	AFTPH	Q6ULP2	937 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CYHR1	Q6ZMK1	362 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MED25	Q71SY5	747 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TAS2R42	Q7RTR8	314 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OVCH1	Q7RTY7	1134 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PRSS41	Q7RTY9	318 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TAX1BP1	Q86VP1	789 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CAND1	Q86VP6	1230 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TMTC1	Q8IUR5	882 aa		4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MCAT	Q8IVS2	390 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CHERP	Q8IWX8	916 aa	Known RBP	4.26	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TBC1D21	Q8IYX1	336 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms