RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 RD3Q7Z3Z2 195 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 PIWIL4Q7Z3Z4 852 aaKnown RBP7.81□□□□□ -1.16
COPS3-215ENST00000578317 ADAMTSL2Q86TH1 951 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 NRROSQ86YC3 692 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 PHACTR4Q8IZ21 702 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 SPATA6LQ8N4H0 392 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 LILRA3Q8N6C8 439 aaPredicted RBP7.81□□□□□ -1.16
COPS3-215ENST00000578317 MAGEC3Q8TD91 643 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 ZFPM2Q8WW38 1151 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 PIGKQ92643 395 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 TFGQ92734 400 aaPredicted RBP7.81□□□□□ -1.16
COPS3-215ENST00000578317 PTERQ96BW5 349 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 FOPNLQ96NB1 174 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 ATOH8Q96SQ7 321 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 ELF4Q99607 663 aaPredicted RBP7.81□□□□□ -1.16
COPS3-215ENST00000578317 GSDMCQ9BYG8 508 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 IQCGQ9H095 443 aaKnown RBP7.81□□□□□ -1.16
COPS3-215ENST00000578317 PARVBQ9HBI1 364 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 MID2Q9UJV3 735 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 CSNK1G3Q9Y6M4 447 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 ZNF106Q9H2Y7 1883 aaKnown RBP7.81□□□□□ -1.16
COPS3-215ENST00000578317 ABCA7Q8IZY2 2146 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 PLXND1Q9Y4D7 1925 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 A0A1B0GVT2 93 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 A6NCN8 305 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 LMO7DNF2Z398 122 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 CDC7O00311 574 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 IFRD1O00458 451 aaPredicted RBP7.8□□□□□ -1.16
COPS3-215ENST00000578317 BTN3A1O00481 513 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 BIRC5O15392 142 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 KLK8O60259 260 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 EPN2O95208 641 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 TOP3BO95985 862 aaKnown RBP7.8□□□□□ -1.16
COPS3-215ENST00000578317 ALBP02768 609 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 TPBGLP0DKB5 382 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 MTHFD2P13995 350 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 CTSEP14091 401 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 HOXB4P17483 251 aaPredicted RBP7.8□□□□□ -1.16
COPS3-215ENST00000578317 HPDP32754 393 aaPredicted RBP7.8□□□□□ -1.16
COPS3-215ENST00000578317 PREPP48147 710 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 ARL4DP49703 201 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 AP1S2P56377 157 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 BNC1Q01954 994 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 OR4D1Q15615 310 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 TSNQ15631 228 aaKnown RBP7.8□□□□□ -1.16
COPS3-215ENST00000578317 SEPT7Q16181 437 aaKnown RBP7.8□□□□□ -1.16
COPS3-215ENST00000578317 PPP1R3AQ16821 1122 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 METTL2BQ6P1Q9 378 aaKnown RBP7.8□□□□□ -1.16
COPS3-215ENST00000578317 TTC23LQ6PF05 361 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 IYDQ6PHW0 289 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 IL27RAQ6UWB1 636 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 GPSM1Q86YR5 675 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 C19orf47Q8N9M1 422 aaKnown RBP7.8□□□□□ -1.16
COPS3-215ENST00000578317 FAM76AQ8TAV0 307 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 MCOLN3Q8TDD5 553 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 DLG3Q92796 817 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 CCDC126Q96EE4 140 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 FAM111AQ96PZ2 611 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 TRIM54Q9BYV2 358 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 ALG9Q9H6U8 611 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 DNAJC28Q9NX36 388 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 NKIRAS1Q9NYS0 192 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 OGFRQ9NZT2 677 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 SLC17A7Q9P2U7 560 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 COPG2Q9UBF2 871 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 SPASTQ9UBP0 616 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 TBC1D29Q9UFV1 150 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 APOBEC3BQ9UH17 382 aaKnown RBP7.8□□□□□ -1.16
COPS3-215ENST00000578317 IKZF3Q9UKT9 509 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 TMCO1Q9UM00 188 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 KCNK6Q9Y257 313 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 DNAJC16Q9Y2G8 782 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 PLEKHM1Q9Y4G2 1056 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 OARD1Q9Y530 152 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 HEBP2Q9Y5Z4 205 aa7.8□□□□□ -1.16
COPS3-215ENST00000578317 G3V2L1 256 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 YKT6O15498 198 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 PDPK1O15530 556 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 PIAS2O75928 621 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 C1orf105O95561 183 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 CATP04040 527 aaKnown RBP7.79□□□□□ -1.16
COPS3-215ENST00000578317 RPN2P04844 631 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 BPGMP07738 259 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 RETP07949 1114 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 HIST1H2AGP0C0S8 130 aaPredicted RBP7.79□□□□□ -1.16
COPS3-215ENST00000578317 SLC35G4P0C7Q5 338 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 F3P13726 295 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 SLC2A4P14672 509 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 CPA3P15088 417 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 XRCC1P18887 633 aaPredicted RBP7.79□□□□□ -1.16
COPS3-215ENST00000578317 HIST1H2ADP20671 130 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 CYP2A7P20853 494 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 ATP5F1P24539 256 aaPredicted RBP7.79□□□□□ -1.16
COPS3-215ENST00000578317 NDUFS1P28331 727 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 OAS2P29728 719 aaKnown RBP7.79□□□□□ -1.16
COPS3-215ENST00000578317 PBLDP30039 288 aaPredicted RBP7.79□□□□□ -1.16
COPS3-215ENST00000578317 GGT5P36269 586 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 ACTR1BP42025 376 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 HALP42357 657 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 ARRB1P49407 418 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms