RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 RPL22P35268 128 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 PPARGP37231 505 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 FOLR3P41439 243 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 GCGRP47871 477 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 DCDP81605 110 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 SLC9A5Q14940 896 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 SIX1Q15475 284 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 PRR30Q53SZ7 412 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 MLIPQ5VWP3 458 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 TLDC1Q6P9B6 456 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 ZNF662Q6ZS27 426 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 KRT222Q8N1A0 295 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 LMNTD1Q8N9Z9 388 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 UBE2Q2Q8WVN8 375 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 IP6K3Q96PC2 410 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 IL17FQ96PD4 163 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 PSMG3-AS1Q96PY0 264 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 SMAD5Q99717 465 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 EIF2B3Q9NR50 452 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 CHRAC1Q9NRG0 131 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 TREX1Q9NSU2 369 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 TXLNGQ9NUQ3 528 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 IRAK4Q9NWZ3 460 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 LUZP4Q9P127 313 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 CIDEBQ9UHD4 219 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 GPN3Q9UHW5 284 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 VPS4AQ9UN37 437 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 KLHL20Q9Y2M5 609 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 PTRH2Q9Y3E5 179 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 CNTRLQ7Z7A1 2325 aa16.01■□□□□ 0.15
CDK5RAP3-206ENST00000578018 UNC79Q9P2D8 2635 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 DOCK10Q96BY6 2186 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 DOPEY1Q5JWR5 2465 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 PRMT5O14744 637 aaPredicted RBP16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 KRT86O43790 486 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 SLCO2B1O94956 709 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 GP1BBP13224 206 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 CD9P21926 228 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 AOAHP28039 575 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 TTPAP49638 278 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 FOXL2P58012 376 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 RAPSNQ13702 412 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 SSPNQ14714 243 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 TMED2Q15363 201 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 NKAIN1Q4KMZ8 207 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 PCID2Q5JVF3 399 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 MEI1Q5TIA1 1274 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 VWA5B1Q5TIE3 1220 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 SLC6A19Q695T7 634 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 MRPL14Q6P1L8 145 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 RBMXL3Q8N7X1 1067 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 OR2Y1Q8NGV0 311 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 OR2L8Q8NGY9 312 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 CFAP61Q8NHU2 1237 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 P2RY12Q9H244 342 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 EURLQ9NYK6 297 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 IFT80Q9P2H3 777 aaPredicted RBP16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 NDOR1Q9UHB4 597 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 ANAPC5Q9UJX4 755 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 NOTCH2Q04721 2471 aa16■□□□□ 0.15
CDK5RAP3-206ENST00000578018 BLACEA4D250 179 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 RASGRF2O14827 1237 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 CD3EAPO15446 510 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 S1PR4O95977 384 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 UMODP07911 640 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 CD63P08962 238 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 ATXN8OSP0DMR3 200 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 ITGAXP20702 1163 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 SESN2P58004 480 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 CRADDP78560 199 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 RPS6KA1Q15418 735 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 INPP5JQ15735 1006 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 CCNG2Q16589 344 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 DCAF10Q5QP82 559 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 DRICH1Q6PGQ1 229 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 PPP1R32Q7Z5V6 425 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 TAX1BP1Q86VP1 789 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 TMEM151BQ8IW70 566 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 MPP5Q8N3R9 675 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 C2orf73Q8N5S3 287 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 PNPLA2Q96AD5 504 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 SLC22A18Q96BI1 424 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 FER1L6-AS2Q96M78 137 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 NDC1Q9BTX1 674 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 MFRPQ9BY79 579 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 IL22Q9GZX6 179 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 SLC22A11Q9NSA0 550 aa15.99■□□□□ 0.15
CDK5RAP3-206ENST00000578018 BASP1P80723 227 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-206ENST00000578018 FCRL6Q6DN72 434 aa15.98■□□□□ 0.15
CDK5RAP3-206ENST00000578018 PTRHD1Q6GMV3 140 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-206ENST00000578018 MCATQ8IVS2 390 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-206ENST00000578018 CLEC1AQ8NC01 280 aa15.98■□□□□ 0.15
CDK5RAP3-206ENST00000578018 DLG3Q92796 817 aa15.98■□□□□ 0.15
CDK5RAP3-206ENST00000578018 PANX3Q96QZ0 392 aa15.98■□□□□ 0.15
CDK5RAP3-206ENST00000578018 P4HTMQ9NXG6 502 aa15.98■□□□□ 0.15
CDK5RAP3-206ENST00000578018 C5AR2Q9P296 337 aa15.98■□□□□ 0.15
CDK5RAP3-206ENST00000578018 GNPTGQ9UJJ9 305 aa15.98■□□□□ 0.15
CDK5RAP3-206ENST00000578018 A0A1B0GX78 115 aa15.97■□□□□ 0.15
CDK5RAP3-206ENST00000578018 PEX12O00623 359 aa15.97■□□□□ 0.15
CDK5RAP3-206ENST00000578018 IGHEP01854 428 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms