RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 EXD1Q8NHP7 514 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 CCDC107Q8WV48 283 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 C10orf90Q96M02 699 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 ZNF300Q96RE9 604 aaPredicted RBP2.05□□□□□ -2.08
TOP2A-202ENST00000577541 RAD9AQ99638 391 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 CENPOQ9BU64 300 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 KIFC3Q9BVG8 833 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 MRPL1Q9BYD6 325 aaKnown RBP2.05□□□□□ -2.08
TOP2A-202ENST00000577541 OR2B2Q9GZK3 357 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 THAP2Q9H0W7 228 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 OSGEPL1Q9H4B0 414 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 SYNCQ9H7C4 482 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 SERINC1Q9NRX5 453 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 MAN2C1Q9NTJ4 1040 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 B3GAT1Q9P2W7 334 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 PCDH11YQ9BZA8 1340 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 GPR75-ASB3A0A0A6YYF3 556 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 PTGES3LE9PB15 166 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 XRCC3O43542 346 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 CDK2AP2O75956 126 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 SEC24AO95486 1093 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 ZSCAN5DPP0CG00 497 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 DUX4L4P0CJ87 422 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 PGFP49763 221 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 ALDH3A2P51648 485 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 GEMIN4P57678 1058 aaKnown RBP2.04□□□□□ -2.08
TOP2A-202ENST00000577541 LMOD3Q0VAK6 560 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 CALCOCO2Q13137 446 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 DRP2Q13474 957 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 HNRNPDQ14103 355 aaKnown RBP2.04□□□□□ -2.08
TOP2A-202ENST00000577541 KRT33BQ14525 404 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 PCLAFQ15004 111 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 TAF1BQ53T94 588 aaPredicted RBP2.04□□□□□ -2.08
TOP2A-202ENST00000577541 ELFN2Q5R3F8 820 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 WLSQ5T9L3 541 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 TMPRSS11FQ6ZWK6 438 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 MAATS1Q7Z4T9 603 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 COMMD2Q86X83 199 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 TMEM139Q8IV31 216 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 ARHGAP24Q8N264 748 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 Q8N377 158 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 GUF1Q8N442 669 aaKnown RBP2.04□□□□□ -2.08
TOP2A-202ENST00000577541 TEX19Q8NA77 164 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 OR5M8Q8NGP6 311 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 OR1L3Q8NH93 324 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 NSUN4Q96CB9 384 aaKnown RBP2.04□□□□□ -2.08
TOP2A-202ENST00000577541 FAM120BQ96EK7 910 aaKnown RBP2.04□□□□□ -2.08
TOP2A-202ENST00000577541 SAT2Q96F10 170 aaPredicted RBP2.04□□□□□ -2.08
TOP2A-202ENST00000577541 MS4A10Q96PG2 267 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 PIGQQ9BRB3 760 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 TRIM6Q9C030 488 aaPredicted RBP2.04□□□□□ -2.08
TOP2A-202ENST00000577541 UBA5Q9GZZ9 404 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 SHARPINQ9H0F6 387 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 SMARCAD1Q9H4L7 1026 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 EPHA6Q9UF33 1036 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 MAN1B1Q9UKM7 699 aa2.04□□□□□ -2.08
TOP2A-202ENST00000577541 B4DLN1 442 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 ADAMDEC1O15204 470 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 TSPAN1O60635 241 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 ZBED4O75132 1171 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 AVILO75366 819 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 GJB3O75712 270 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 DUS4LO95620 317 aaKnown RBP2.03□□□□□ -2.08
TOP2A-202ENST00000577541 CLDN1O95832 211 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 HSPA8P11142 646 aaKnown RBP2.03□□□□□ -2.08
TOP2A-202ENST00000577541 BDNFP23560 247 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 HOXD13P35453 343 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 SLC9A3P48764 834 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 HNRNPA3P51991 378 aaKnown RBP2.03□□□□□ -2.08
TOP2A-202ENST00000577541 MRPL12P52815 198 aaKnown RBP2.03□□□□□ -2.08
TOP2A-202ENST00000577541 TRA2BP62995 288 aaKnown RBP2.03□□□□□ -2.08
TOP2A-202ENST00000577541 CSNK2BP67870 215 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 CREB5Q02930 508 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 DMPKQ09013 629 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 EPS8Q12929 822 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 GRAPQ13588 217 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 BAATQ14032 418 aaPredicted RBP2.03□□□□□ -2.08
TOP2A-202ENST00000577541 FASTKD3Q14CZ7 662 aaKnown RBP2.03□□□□□ -2.08
TOP2A-202ENST00000577541 NECTIN1Q15223 517 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 ODF4Q2M2E3 257 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 SYT14P1Q58G82 188 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 XKR3Q5GH77 459 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 ZNF343Q6P1L6 599 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 TEX38Q6PEX7 206 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 PAQR6Q6TCH4 344 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 C16orf54Q6UWD8 224 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 FAM198BQ6UWH4 519 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 Q6ZR54 194 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 SZRD1Q7Z422 152 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 KBTBD6Q86V97 674 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 FAM114A1Q8IWE2 563 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 AFAP1Q8N556 730 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 LINC00612Q8N6U2 182 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 TDRD5Q8NAT2 981 aaKnown RBP2.03□□□□□ -2.08
TOP2A-202ENST00000577541 C17orf47Q8NEP4 570 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 ZNF622Q969S3 477 aaKnown RBP eCLIP2.03□□□□□ -2.08
TOP2A-202ENST00000577541 SKA1Q96BD8 255 aa2.03□□□□□ -2.08
TOP2A-202ENST00000577541 PRICKLE1Q96MT3 831 aaPredicted RBP2.03□□□□□ -2.08
TOP2A-202ENST00000577541 BARD1Q99728 777 aaKnown RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms