RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 RAB17Q9H0T7 212 aa9.21□□□□□ -0.94
NPLOC4-219ENST00000576713 ABCG4Q9H172 646 aa9.21□□□□□ -0.94
NPLOC4-219ENST00000576713 INTS10Q9NVR2 710 aaKnown RBP9.21□□□□□ -0.94
NPLOC4-219ENST00000576713 ACSL5Q9ULC5 683 aa9.21□□□□□ -0.94
NPLOC4-219ENST00000576713 PLAGL1Q9UM63 463 aa9.21□□□□□ -0.94
NPLOC4-219ENST00000576713 USP24Q9UPU5 2620 aa9.21□□□□□ -0.94
NPLOC4-219ENST00000576713 MAP1BP46821 2468 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 TRABD2BA6NFA1 517 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 LILRA5A6NI73 299 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 OR5K4A6NMS3 321 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 LIN7AO14910 233 aaPredicted RBP9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 TMPRSS2O15393 492 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 KIF1CO43896 1103 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 TTC4O95801 387 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 VIPP01282 170 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 FTH1P02794 183 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 ITGB2P05107 769 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 RHOXF2BP0C7M4 288 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 MYBL2P10244 700 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 HGFP14210 728 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 PKMP14618 531 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 JUPP14923 745 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 HALP42357 657 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 MAGEA4P43358 317 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 GPR3P46089 330 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 LEPRP48357 1165 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 ADARP55265 1226 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 ZFP36L1Q07352 338 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 HSPA14Q0VDF9 509 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 PRKG2Q13237 762 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 SQSTM1Q13501 440 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 CUL1Q13616 776 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 TUBB2AQ13885 445 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 SPIDRQ14159 915 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 EFTUD2Q15029 972 aaKnown RBP eCLIP9.2□□□□□ -0.942e-13■■□□□ 13.1
NPLOC4-219ENST00000576713 ACSBG2Q5FVE4 666 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 RBM44Q6ZP01 1051 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 SDCCAG8Q86SQ7 713 aaPredicted RBP9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 GSPT2Q8IYD1 628 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 SLC22A15Q8IZD6 547 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 BBOF1Q8ND07 529 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 MDM1Q8TC05 714 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 CXorf40BQ96DE9 158 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 MEGF10Q96KG7 1140 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 CCDC74BQ96LY2 380 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 SLC38A3Q99624 504 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 OLFM1Q99784 485 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 RHOXF2Q9BQY4 288 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 NAT9Q9BTE0 207 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 HGH1Q9BTY7 390 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 MENTQ9BUN1 341 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 TUBB2BQ9BVA1 445 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 ACBD3Q9H3P7 528 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 XKR8Q9H6D3 395 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 LRRC4CQ9HCJ2 640 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 POT1Q9NUX5 634 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 SLC24A2Q9UI40 661 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 GNPTGQ9UJJ9 305 aa9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 GOLGA4Q13439 2230 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-219ENST00000576713 TPRP12270 2363 aaKnown RBP9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 TCRBV9S1A1TA0A576 114 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 TMEM8BA6NDV4 472 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 BTN3A3O00478 584 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 TCEA3O75764 348 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 FAM155BO75949 473 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 UBXN7O94888 489 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 SLCO2B1O94956 709 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 CPNE6O95741 557 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 ESR1P03372 595 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 MPOP05164 745 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 THRAP10827 490 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 ITIH1P19827 911 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 ETV5P41161 510 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 ID3Q02535 119 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 ABRQ12979 859 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 RPA4Q13156 261 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 FRG1Q14331 258 aaKnown RBP9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 MAP9Q49MG5 647 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 SYTL3Q4VX76 610 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 RNF187Q5TA31 235 aaPredicted RBP9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 FBXO38Q6PIJ6 1188 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 LRRC6Q86X45 466 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 TRIM48Q8IWZ4 208 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 GALNT15Q8N3T1 639 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 CEP112Q8N8E3 955 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 MNS1Q8NEH6 495 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 OR52E1Q8NGJ3 308 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 GSDMBQ8TAX9 411 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 CD200R1Q8TD46 325 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 PYROXD1Q8WU10 500 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 IFT81Q8WYA0 676 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 NCSTNQ92542 709 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 TFGQ92734 400 aaPredicted RBP9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 RNF31Q96EP0 1072 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 FERD3LQ96RJ6 166 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 GPR21Q99679 349 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 FAM167BQ9BTA0 163 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 AARSD1Q9BTE6 412 aaKnown RBP9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 TWSG1Q9GZX9 223 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 KIR3DX1Q9H7L2 352 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms