RNA–Protein interactions for RNA: ENST00000576202.1

TSR1-205, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-205ENST00000576202 SMARCAL1Q9NZC9 954 aa12.54□□□□□ -0.4
TSR1-205ENST00000576202 PLAGL1Q9UM63 463 aa12.54□□□□□ -0.4
TSR1-205ENST00000576202 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.54□□□□□ -0.4
TSR1-205ENST00000576202 PDZD2O15018 2839 aa12.54□□□□□ -0.4
TSR1-205ENST00000576202 DIDO1Q9BTC0 2240 aaKnown RBP12.53□□□□□ -0.4
TSR1-205ENST00000576202 MACROD2A1Z1Q3 448 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 KCNN4O15554 427 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 ONECUT2O95948 504 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 TPM1P09493 284 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 NSG1P42857 185 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 OTUD4Q01804 1114 aaKnown RBP12.53□□□□□ -0.4
TSR1-205ENST00000576202 CACNG1Q06432 222 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 RBBP7Q16576 425 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 SYTL3Q4VX76 610 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 KIRREL2Q6UWL6 708 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 FJX1Q86VR8 437 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 MCATQ8IVS2 390 aaKnown RBP12.53□□□□□ -0.4
TSR1-205ENST00000576202 MCEMP1Q8IX19 187 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 FAM20CQ8IXL6 584 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 CCDC110Q8TBZ0 833 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 ACTL9Q8TC94 416 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 CDKN2AIPNLQ96HQ2 116 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 THOC3Q96J01 351 aaKnown RBP12.53□□□□□ -0.4
TSR1-205ENST00000576202 VPS50Q96JG6 964 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 SPATA13Q96N96 652 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 RUBCNLQ9H714 662 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 OLAHQ9NV23 265 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 NXT1Q9UKK6 140 aaKnown RBP12.53□□□□□ -0.4
TSR1-205ENST00000576202 KLHL20Q9Y2M5 609 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 PRSS21Q9Y6M0 314 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 MDC1Q14676 2089 aaKnown RBP12.53□□□□□ -0.4
TSR1-205ENST00000576202 DOCK10Q96BY6 2186 aa12.53□□□□□ -0.4
TSR1-205ENST00000576202 SLC5A10A0PJK1 596 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 CCDC78A2IDD5 438 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 HEATR9A2RTY3 570 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 BHMG1C9JSJ3 638 aaPredicted RBP12.52□□□□□ -0.41
TSR1-205ENST00000576202 DSCR3O14972 297 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 MFAP3LO75121 409 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 RBP3P10745 1247 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 PKLRP30613 574 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 RAB28P51157 221 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 EIF3EP60228 445 aaKnown RBP12.52□□□□□ -0.41
TSR1-205ENST00000576202 COPS2P61201 443 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 PLOD1Q02809 727 aaPredicted RBP12.52□□□□□ -0.41
TSR1-205ENST00000576202 MFAP5Q13361 173 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 ITIH4Q14624 930 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 YOD1Q5VVQ6 348 aaPredicted RBP12.52□□□□□ -0.41
TSR1-205ENST00000576202 RPUSD3Q6P087 351 aaKnown RBP12.52□□□□□ -0.41
TSR1-205ENST00000576202 ISLR2Q6UXK2 745 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 PACS1Q6VY07 963 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 NAPRTQ6XQN6 538 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 LINC00696Q6ZRV3 163 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 SHISA6Q6ZSJ9 500 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 COX15Q7KZN9 410 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 KLHDC8BQ8IXV7 354 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 BCORP1Q8N888 145 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 OR11G2Q8NGC1 345 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 KRT35Q92764 455 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 RELTQ969Z4 430 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 SOX17Q9H6I2 414 aaPredicted RBP12.52□□□□□ -0.41
TSR1-205ENST00000576202 LUC7LQ9NQ29 371 aaKnown RBP12.52□□□□□ -0.41
TSR1-205ENST00000576202 SEMA3GQ9NS98 782 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 CUTCQ9NTM9 273 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 COPG2Q9UBF2 871 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 SNRNP200O75643 2136 aaKnown RBP12.52□□□□□ -0.41
TSR1-205ENST00000576202 CSMD2Q7Z408 3487 aa12.52□□□□□ -0.41
TSR1-205ENST00000576202 CBFA2T2O43439 604 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 JRKO75564 520 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 OR56A5P0C7T3 313 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 TPH1P17752 444 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 CTNNA2P26232 953 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 RIPPLY3P57055 190 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 Q0VFX4 171 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 GRM7Q14831 915 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 POU6F1Q14863 301 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 ZC3H12BQ5HYM0 836 aaKnown RBP12.51□□□□□ -0.41
TSR1-205ENST00000576202 TCTE1Q5JU00 501 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 C11orf63Q6NUN7 778 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 DARS2Q6PI48 645 aaKnown RBP12.51□□□□□ -0.41
TSR1-205ENST00000576202 LINC01555Q8NAE3 123 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 CATSPER1Q8NEC5 780 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 STYXQ8WUJ0 223 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.51□□□□□ -0.41
TSR1-205ENST00000576202 SLC22A18Q96BI1 424 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 LMF1Q96S06 567 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 FAM118BQ9BPY3 351 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 TRIM56Q9BRZ2 755 aaKnown RBP12.51□□□□□ -0.41
TSR1-205ENST00000576202 ENAMQ9NRM1 1142 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 CTSFQ9UBX1 484 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 EFR3BQ9Y2G0 817 aa12.51□□□□□ -0.41
TSR1-205ENST00000576202 VSTM2BA6NLU5 285 aa12.5□□□□□ -0.41
TSR1-205ENST00000576202 PJA2O43164 708 aa12.5□□□□□ -0.41
TSR1-205ENST00000576202 KLHL18O94889 574 aa12.5□□□□□ -0.41
TSR1-205ENST00000576202 CD9P21926 228 aa12.5□□□□□ -0.41
TSR1-205ENST00000576202 MCM3P25205 808 aa12.5□□□□□ -0.41
TSR1-205ENST00000576202 MSNP26038 577 aaKnown RBP12.5□□□□□ -0.41
TSR1-205ENST00000576202 ART3Q13508 389 aa12.5□□□□□ -0.41
TSR1-205ENST00000576202 DNAJC21Q5F1R6 531 aaKnown RBP12.5□□□□□ -0.41
TSR1-205ENST00000576202 KCTD11Q693B1 232 aa12.5□□□□□ -0.41
TSR1-205ENST00000576202 ZNF324BQ6AW86 544 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms